HHsearch alignment for GI: 254780270 and conserved domain: pfam05272
>pfam05272 VirE Virulence-associated protein E. This family contains several bacterial virulence-associated protein E like proteins.
Probab=95.60 E-value=0.21 Score=29.40 Aligned_cols=159 Identities=17% Similarity=0.262 Sum_probs=82.4
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH--HHHHHH--H-HH-HHHCCCCC-CCEEEEECCCCCCHHHHHHHH
Q ss_conf 65404158766322106889987766520116899--999999--9-99-98424446-735998605656502799999
Q gi|254780270|r 314 WLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKVK--ERIIEY--L-AV-QMRVIKNK-GLILCFVGPPGVGKTSLAQSI 386 (820)
Q Consensus 314 ~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl~~vK--~rile~--l-av-~~~~~~~~-g~il~l~gppgvGKts~~~si 386 (820)
T Consensus 1 yl~sl~WDG~~-------Ri~~l~-~~~~g~~d~~~~~~~~~~wligaVaR~~~pG~k~d~vlvL~G~QG~gKStf~~~L 72 (198)
T pfam05272 1 YLESLEWDGIP-------RIETLF-IDYLGAEDSLYTREVSKLFLIGAVARVYEPGCKFDHVLILQGAQGSGKSTFLKKL 72 (198)
T ss_pred CCCCCCCCCCC-------HHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf 98568768811-------799999-9962999759999999999999999997789767767899889867899999997
Q ss_pred HHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCC
Q ss_conf 97708824998618888888835632001456712899999832788739999331554231177115566554060016
Q gi|254780270|r 387 AKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQN 466 (820)
Q Consensus 387 a~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn 466 (820)
T Consensus 73 ~~----~~~~d~~~~~~~-------k---------D~~~~l~~----~wi~el~El~~~~k---~~-~~~-lK~fls~~~ 123 (198)
T pfam05272 73 GG----EWFTDSIRSFEG-------K---------DAYEKLQG----VWIVEIAELDGFSK---AE-VEA-IKAFITRTV 123 (198)
T ss_pred HH----HHCCCCCCCCCC-------C---------HHHHHHHH----HHHHHHHHHHHCCH---HH-HHH-HHHHHCCHH
T ss_conf 37----751565557677-------3---------89999998----78732598751365---32-999-999845413
Q ss_pred CCEEEEECCCCCC-CCCEEEEEECCCCC-CCHHH-CCCEEEEEECC
Q ss_conf 8133201035236-44279999348655-44131-17247998258
Q gi|254780270|r 467 SSFVDHYLEVEYD-LSDVMFIMTANTLN-IPLPL-MDRMEIIRIAG 509 (820)
Q Consensus 467 ~~f~d~y~~~~~d-ls~v~fi~tan~~~-i~~~l-~drme~i~~~~ 509 (820)
T Consensus 124 d~~R~pY~~~~~~~pR~~vfigTtN~~~~L~D~TGnRRF~pi~v~~ 169 (198)
T pfam05272 124 DSFRAPYGRRAESFPRQCVFVGTTNRDEFLKDPTGNRRFWPVKVGK 169 (198)
T ss_pred HCCHHCCCCCCEECCEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
T ss_conf 1231022356400654799999638876557999981689999688