RPSBLAST alignment for GI: 254780270 and conserved domain: pfam07724
>gnl|CDD|116338 pfam07724, AAA_2, AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model. Length = 168
Score = 46.4 bits (111), Expect = 3e-05
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 40/174 (22%)
Query: 371 FVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTY---------IGSMPG 421
F+GP GVGKT LA+++A+ L + A IR Y IG+ PG
Sbjct: 8 FLGPTGVGKTELAKALAE----------LLFGDERALIRIDMSEYMEEHSVSRLIGAPPG 57
Query: 422 RI------IQSLKRAKRSNPLLLLDEIDKMGSD-LRGDPSAALLEVLDPAQNSSFVDHYL 474
+ + ++ ++L+DEI+K LL++L+ + D
Sbjct: 58 YVGYEEGGQLTEAVRRKPYSIVLIDEIEKAHPGVQN-----DLLQILE---GGTLTDKQ- 108
Query: 475 EVEYDLSDVMFIMTANTLNIPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVL 528
+ D + +FIMT N + R+ + E L+ L+KK
Sbjct: 109 GRKVDFRNTLFIMTGN-----FGSEKISDASRLGKSPDYELLKELVMDLLKKGF 157