RPSBLAST alignment for GI: 254780270 and conserved domain: COG0542

>gnl|CDD|30888 COG0542, ClpA, ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones]. Length = 786

 Score = 46.5 bits (110), Expect = 3e-05
 Identities = 89/434 (20%), Positives = 155/434 (35%), Gaps = 118/434 (27%)

Query: 184 DVIAANLSIKVAERQKILEAVSVKERLEMLLVFMESEISVLQVEKRIRSRVKRQMEKTQR 243
           D++    +    E  K  E   ++  L  L    E E   L+ E+  + +         +
Sbjct: 384 DLLDEAGARVRLEIDKPEELDELERELAQL----EIEKEALEREQDEKEKKLIDEIIKLK 439

Query: 244 EYYLHEQMKAIQKELDNGEEGRDEISDFEARISKI---RLSKEAREKALSELQKLR---- 296
           E  + E  K ++ E+D      D+I++  AR + I   +L ++ +EK L+  ++L+    
Sbjct: 440 EGRIPELEKELEAEVD-----EDDIAEVVARWTGIPVAKLLEDEKEKLLNLERRLKKRVI 494

Query: 297 -QMNPLSAESSVVRNYLDWLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKVKERIIEYL 355
            Q   + A S  +R                             +   GL      I  +L
Sbjct: 495 GQDEAVEAVSDAIR-----------------------------RARAGLGDPNRPIGSFL 525

Query: 356 AVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKA---TGRQYVRMSLGGVYDEADIRGHR 412
                          F+GP GVGKT LA+++A+A     +  +R+ +    ++  +    
Sbjct: 526 ---------------FLGPTGVGKTELAKALAEALFGDEQALIRIDMSEYMEKHSVSR-- 568

Query: 413 RTYIGSMPGRI----IQSLKRAKRSNP--LLLLDEIDKMGSDLRGDPSAALLEVLDPAQN 466
              IG+ PG +       L  A R  P  ++LLDEI+K   D+       LL+VLD   +
Sbjct: 569 --LIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDV----FNLLLQVLD---D 619

Query: 467 SSFVDHYLEVEYDLSDVMFIMTAN---------TLNIPLPLMDRM--------------- 502
               D       D  + + IMT+N                  + +               
Sbjct: 620 GRLTDGQ-GRTVDFRNTIIIMTSNAGSEEILRDADGDDFADKEALKEAVMEELKKHFRPE 678

Query: 503 ------EIIRIAGYTEEEKLQIAKNHL--VKKVLTEHALKQEECCISDGVLLDII-RLFT 553
                 EII     ++E   +I    L  + K L E  +  E   +SD     +  + + 
Sbjct: 679 FLNRIDEIIPFNPLSKEVLERIVDLQLNRLAKRLAERGITLE---LSDEAKDFLAEKGYD 735

Query: 554 HEAGVRSFERALMK 567
            E G R   RA+ +
Sbjct: 736 PEYGARPLRRAIQQ 749