RPSBLAST alignment for GI: 254780270 and conserved domain: COG1222
>gnl|CDD|31415 COG1222, RPT1, ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]. Length = 406
Score = 44.8 bits (106), Expect = 1e-04
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 52/271 (19%)
Query: 343 GLEKVKERIIEY---------LAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ 393
GL++ + I E L ++ + KG++L GPPG GKT LA+++A T
Sbjct: 155 GLDEQIQEIREVVELPLKNPELFEELGIDPPKGVLL--YGPPGTGKTLLAKAVANQTDAT 212
Query: 394 YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNP-LLLLDEIDKMGSDLRGD 452
++R+ + + YIG + + + A+ P ++ +DEID +G+ R D
Sbjct: 213 FIRVVGSELVQK---------YIGEGARLVRELFELAREKAPSIIFIDEIDAIGAK-RFD 262
Query: 453 PSAA--------LLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLNIPLPLM----- 499
+ +LE+L Q F +V IM N +I P +
Sbjct: 263 SGTSGDREVQRTMLELL--NQLDGF--------DPRGNVKVIMATNRPDILDPALLRPGR 312
Query: 500 -DRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGV 558
DR I EE + +I K H K L + + +++G ++ EAG+
Sbjct: 313 FDR--KIEFPLPDEEGRAEILKIHTRKMNLADDVDLELLARLTEGFSGADLKAICTEAGM 370
Query: 559 RSFER----ALMKIARKAVTKIVKNSDTTVS 585
+ M+ KAV K+VK S
Sbjct: 371 FAIRERRDEVTMEDFLKAVEKVVKKKKKLSS 401