HHsearch alignment for GI: 254780271 and conserved domain: COG0324

>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis].
Probab=97.29  E-value=0.00031  Score=50.19  Aligned_cols=45  Identities=33%  Similarity=0.485  Sum_probs=35.5

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCC
Q ss_conf             6835884073321769999999871853131012211111103556330
Q gi|254780271|r  113 KSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVEN  161 (424)
Q Consensus       113 ~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dves  161 (424)
T Consensus         3 ~~~i~I~GPTAsGKT~lai~LAk~~~~eIIs~DSmQv----Yr~mdIGT   47 (308)
T COG0324           3 PKLIVIAGPTASGKTALAIALAKRLGGEIISLDSMQV----YRGLDIGT   47 (308)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCHHHH----CCCCCCCC
T ss_conf             6379998988757789999999982992893023553----18886307