HHsearch alignment for GI: 254780271 and conserved domain: COG0470

>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=98.35  E-value=6.8e-07  Score=68.84  Aligned_cols=115  Identities=26%  Similarity=0.281  Sum_probs=72.0

Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE---------------
Q ss_conf             03085999999999998658875212101355225683588407332176999999987185313---------------
Q gi|254780271|r   78 YVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFT---------------  142 (424)
Q Consensus        78 yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~---------------  142 (424)
T Consensus         2 ~~~~~~~~~~~l~~~~~~~-~~------------~~halL~~Gp~G~Gktt~a~~lA~~l~~~~~~~~~~~~~~~~~~~~   68 (325)
T COG0470           2 ELVPWQEAVKRLLVQALES-GR------------LPHALLFYGPPGVGKTTAALALAKELLCENPTGLLPCGHCRSCKLI   68 (325)
T ss_pred             CCCCCHHHHHHHHHHHHHC-CC------------CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf             6433235899999999865-88------------8761003799999789999999999658664334552002244432


Q ss_pred             ----EHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             ----1012211111103556-33035778876542277654223332233320023333334432102568988753105
Q gi|254780271|r  143 ----MADATTLTEAGYVGED-VENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIME  217 (424)
Q Consensus       143 ----~vdaT~~TE~GYvG~D-vesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkile  217 (424)
T Consensus        69 ~~~~~~d~lel~~s~~~~~~i~~~~vr~~~~~~~~~~~~~~~kviiidead~mt~--------------~A~nallk~lE  134 (325)
T COG0470          69 PAGNHPDFLELNPSDLRKIDIIVEQVRELAEFLSESPLEGGYKVVIIDEADKLTE--------------DAANALLKTLE  134 (325)
T ss_pred             CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCH--------------HHHHHHHHHCC
T ss_conf             0256886599773213333006999999998604465667726999732032698--------------88876754332


Q ss_pred             CC
Q ss_conf             87
Q gi|254780271|r  218 GT  219 (424)
Q Consensus       218 g~  219 (424)
T Consensus       135 ep  136 (325)
T COG0470         135 EP  136 (325)
T ss_pred             CC
T ss_conf             48