HHsearch alignment for GI: 254780271 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=97.11 E-value=0.0023 Score=44.07 Aligned_cols=182 Identities=20% Similarity=0.269 Sum_probs=85.6
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHH
Q ss_conf 97420308599999999999865887521210135522568358-84073321769999999871853131012211111
Q gi|254780271|r 74 VLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNIL-LVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEA 152 (424)
Q Consensus 74 ~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NIL-liGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~ 152 (424)
T Consensus 85 tFdnFv~g~~N~-~A~aa~--~~va~---~~g--~----~~nplfi~G~~GlGKTHLl~Aign~~~~~~--------~~a 144 (408)
T COG0593 85 TFDNFVVGPSNR-LAYAAA--KAVAE---NPG--G----AYNPLFIYGGVGLGKTHLLQAIGNEALANG--------PNA 144 (408)
T ss_pred CHHHEEECCCHH-HHHHHH--HHHHH---CCC--C----CCCCEEEECCCCCCHHHHHHHHHHHHHHHC--------CCC
T ss_conf 554220477449-999999--99875---668--8----689579987999978999999999998629--------986
Q ss_pred HHCCCCCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCC
Q ss_conf 10355633035778876542------277654223332233320023333334432102568988753105870102565
Q gi|254780271|r 153 GYVGEDVENIILKLLQAADY------NVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226 (424)
Q Consensus 153 GYvG~Dvesii~~L~~~a~~------~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~ 226 (424)
T Consensus 145 ~v~y~~se~f~~~~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~l~gk------------~~~qeefFh~FN~----l~~~ 207 (408)
T COG0593 145 RVVYLTSEDFTNDFVKALRDNEMEKFKEKY-SLDLLLIDDIQFLAGK------------ERTQEEFFHTFNA----LLEN 207 (408)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECHHHHHCCC------------HHHHHHHHHHHHH----HHHC
T ss_conf 488504899899999998850488888764-2673555138675677------------1579999999998----8850
Q ss_pred CCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHC
Q ss_conf 56432224302431000123220004678988764123433321111000000016899964105677752206898720
Q gi|254780271|r 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGR 306 (424)
Q Consensus 227 ~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GR 306 (424)
T Consensus 208 -------~k-qIvltsdr---------------------------------------------~P~~l~--~~~~rL~SR 232 (408)
T COG0593 208 -------GK-QIVLTSDR---------------------------------------------PPKELN--GLEDRLRSR 232 (408)
T ss_pred -------CC-EEEEECCC---------------------------------------------CCHHHC--CCCHHHHHH
T ss_conf -------88-79997078---------------------------------------------832211--035889989
Q ss_pred CC--CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf 78--4267211105789999874267799999999874498999968999999995
Q gi|254780271|r 307 LP--VLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARC 360 (424)
Q Consensus 307 lP--iiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~ 360 (424)
T Consensus 233 ~~~Gl~~~I~~Pd~e~r~aiL~k-----------ka~--~~~~~i~~ev~~~la~~ 275 (408)
T COG0593 233 LEWGLVVEIEPPDDETRLAILRK-----------KAE--DRGIEIPDEVLEFLAKR 275 (408)
T ss_pred HHCEEEEEECCCCHHHHHHHHHH-----------HHH--HCCCCCCHHHHHHHHHH
T ss_conf 86305775279888999999999-----------998--65888887999999997