HHsearch alignment for GI: 254780271 and conserved domain: COG1061
>COG1061 SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].
Probab=93.73 E-value=0.11 Score=32.47 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=25.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf 6835884073321769999999871853131
Q gi|254780271|r 113 KSNILLVGPTGCGKTYLAQTLARIIDVPFTM 143 (424)
Q Consensus 113 ~~NILliGPTGvGKTelAr~LAk~l~~PF~~ 143 (424)
T Consensus 55 ~~~gvivlpTGaGKT~va~~~~~~~~~~~Lv 85 (442)
T COG1061 55 ERRGVIVLPTGAGKTVVAAEAIAELKRSTLV 85 (442)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 7867999679998899999999982698899