HHsearch alignment for GI: 254780271 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=98.40  E-value=9.2e-06  Score=60.93  Aligned_cols=207  Identities=21%  Similarity=0.233  Sum_probs=115.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-----EEEHHHHHHHHH-
Q ss_conf             30859999999999986588752121013552256835884073321769999999871853-----131012211111-
Q gi|254780271|r   79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP-----FTMADATTLTEA-  152 (424)
Q Consensus        79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P-----F~~vdaT~~TE~-  152 (424)
T Consensus        19 l~~Re~ei~~l~~~l~~~~~~-----------~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~   87 (366)
T COG1474          19 LPHREEEINQLASFLAPALRG-----------ERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPY   87 (366)
T ss_pred             CCCHHHHHHHHHHHHHHHHCC-----------CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
T ss_conf             103488999999999998558-----------998607998899987328999999999733156757999513078787


Q ss_pred             ----------H---HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             ----------1---035563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r  153 ----------G---YVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       153 ----------G---YvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        88 ~i~~~i~~~~~~~p~~g~~~~~~~~~l~~~~---~~~~~~~IvvLDEid~L~~~~~--------------~~LY~L~r~~  150 (366)
T COG1474          88 QVLSKILNKLGKVPLTGDSSLEILKRLYDNL---SKKGKTVIVILDEVDALVDKDG--------------EVLYSLLRAP  150 (366)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH---HHCCCEEEEEECCHHHHHCCCC--------------CHHHHEECCC
T ss_conf             9999999982689976763268999999977---7418759999764765415464--------------1455111247


Q ss_pred             EEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
Q ss_conf             01025655643222430243100012322000467898876412343332111100000001689996410567775220
Q gi|254780271|r  220 IASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGL  299 (424)
Q Consensus       220 ~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gl  299 (424)
T Consensus       151 ~~~----------~~~v~vi~i~n~~--------------------------------------~~----------~~~l  172 (366)
T COG1474         151 GEN----------KVKVSIIAVSNDD--------------------------------------KF----------LDYL  172 (366)
T ss_pred             CCC----------CEEEEEEEEECCH--------------------------------------HH----------HHHH
T ss_conf             767----------5379999973548--------------------------------------89----------9987


Q ss_pred             HHHHHHCCCC-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             6898720784-267211105789999874267799999999874498999968999999995510678742368999999
Q gi|254780271|r  300 IPEFIGRLPV-LATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKI  378 (424)
Q Consensus       300 iPEl~GRlPi-iV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~i  378 (424)
T Consensus       173 d~rv~s~l~~~~I~F~pY~a~el~~Il~~R~~~-------~~----~~~~~~~~vl~lia~~~a~~~GDAR~aidilr~A  241 (366)
T COG1474         173 DPRVKSSLGPSEIVFPPYTAEELYDILRERVEE-------GF----SAGVIDDDVLKLIAALVAAESGDARKAIDILRRA  241 (366)
T ss_pred             HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH-------HH----CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             566765068763552898989999999999985-------40----4687480399999998876186477608999999


Q ss_pred             HHHH
Q ss_conf             6777
Q gi|254780271|r  379 LLDT  382 (424)
Q Consensus       379 Ledi  382 (424)
T Consensus       242 ~eiA  245 (366)
T COG1474         242 GEIA  245 (366)
T ss_pred             HHHH
T ss_conf             9986