HHsearch alignment for GI: 254780271 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=98.40 E-value=9.2e-06 Score=60.93 Aligned_cols=207 Identities=21% Similarity=0.233 Sum_probs=115.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-----EEEHHHHHHHHH-
Q ss_conf 30859999999999986588752121013552256835884073321769999999871853-----131012211111-
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP-----FTMADATTLTEA- 152 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P-----F~~vdaT~~TE~- 152 (424)
T Consensus 19 l~~Re~ei~~l~~~l~~~~~~-----------~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~ 87 (366)
T COG1474 19 LPHREEEINQLASFLAPALRG-----------ERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPY 87 (366)
T ss_pred CCCHHHHHHHHHHHHHHHHCC-----------CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
T ss_conf 103488999999999998558-----------998607998899987328999999999733156757999513078787
Q ss_pred ----------H---HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf ----------1---035563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 153 ----------G---YVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 153 ----------G---YvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 88 ~i~~~i~~~~~~~p~~g~~~~~~~~~l~~~~---~~~~~~~IvvLDEid~L~~~~~--------------~~LY~L~r~~ 150 (366)
T COG1474 88 QVLSKILNKLGKVPLTGDSSLEILKRLYDNL---SKKGKTVIVILDEVDALVDKDG--------------EVLYSLLRAP 150 (366)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH---HHCCCEEEEEECCHHHHHCCCC--------------CHHHHEECCC
T ss_conf 9999999982689976763268999999977---7418759999764765415464--------------1455111247
Q ss_pred EEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
Q ss_conf 01025655643222430243100012322000467898876412343332111100000001689996410567775220
Q gi|254780271|r 220 IASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGL 299 (424)
Q Consensus 220 ~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gl 299 (424)
T Consensus 151 ~~~----------~~~v~vi~i~n~~--------------------------------------~~----------~~~l 172 (366)
T COG1474 151 GEN----------KVKVSIIAVSNDD--------------------------------------KF----------LDYL 172 (366)
T ss_pred CCC----------CEEEEEEEEECCH--------------------------------------HH----------HHHH
T ss_conf 767----------5379999973548--------------------------------------89----------9987
Q ss_pred HHHHHHCCCC-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 6898720784-267211105789999874267799999999874498999968999999995510678742368999999
Q gi|254780271|r 300 IPEFIGRLPV-LATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKI 378 (424)
Q Consensus 300 iPEl~GRlPi-iV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~i 378 (424)
T Consensus 173 d~rv~s~l~~~~I~F~pY~a~el~~Il~~R~~~-------~~----~~~~~~~~vl~lia~~~a~~~GDAR~aidilr~A 241 (366)
T COG1474 173 DPRVKSSLGPSEIVFPPYTAEELYDILRERVEE-------GF----SAGVIDDDVLKLIAALVAAESGDARKAIDILRRA 241 (366)
T ss_pred HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH-------HH----CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 566765068763552898989999999999985-------40----4687480399999998876186477608999999
Q ss_pred HHHH
Q ss_conf 6777
Q gi|254780271|r 379 LLDT 382 (424)
Q Consensus 379 Ledi 382 (424)
T Consensus 242 ~eiA 245 (366)
T COG1474 242 GEIA 245 (366)
T ss_pred HHHH
T ss_conf 9986