HHsearch alignment for GI: 254780271 and conserved domain: KOG0743
>KOG0743 consensus.
Probab=97.47 E-value=0.00026 Score=50.72 Aligned_cols=134 Identities=27% Similarity=0.368 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHH
Q ss_conf 78999997420308599999999999865887521210135522568358840733217699999998718531310122
Q gi|254780271|r 68 PQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADAT 147 (424)
Q Consensus 68 P~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT 147 (424)
T Consensus 210 K~~I~~Dl~~F~k~k~~Ykrv-----GkawKR---------------GYLLYGPPGTGKSS~IaAmAn~L~ydIydL--- 266 (457)
T KOG0743 210 KERIIDDLDDFIKGKDFYKRV-----GKAWKR---------------GYLLYGPPGTGKSSFIAAMANYLNYDIYDL--- 266 (457)
T ss_pred HHHHHHHHHHHHHCCHHHHHC-----CCCCCC---------------CCEEECCCCCCHHHHHHHHHHHCCCCEEEE---
T ss_conf 899999999997223578864-----845000---------------412047999988899999972058736774---
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHHHHHCCCCEEEC
Q ss_conf 111111035563303577887654227765422333223332002333333----4432102568988753105870102
Q gi|254780271|r 148 TLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPS----ITRDVSGEGVQQALLKIMEGTIASV 223 (424)
Q Consensus 148 ~~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~----~~~dvs~~gvq~~LLkileg~~~~v 223 (424)
T Consensus 267 eLt~---v~~n~d--Lr~LL~~t~------~kSIivIEDIDcs~~l~~~~~~~~~~~~~~~~~VTlSGLLNfiDGlwSsc 335 (457)
T KOG0743 267 ELTE---VKLDSD--LRHLLLATP------NKSILLIEDIDCSFDLRERRKKKKENFEGDLSRVTLSGLLNFLDGLWSSC 335 (457)
T ss_pred EECC---CCCCHH--HHHHHHHCC------CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCC
T ss_conf 4002---368389--999997289------97189996124323044345556645467766066477566413430048
Q ss_pred CCCCCCCCCCCCEEEEECCHH
Q ss_conf 565564322243024310001
Q gi|254780271|r 224 PPQGGRKHPQQEFLQVDTTNI 244 (424)
Q Consensus 224 ~~~~grk~~~~~~~~Idt~ni 244 (424)
T Consensus 336 ---------g~ERIivFTTNh 347 (457)
T KOG0743 336 ---------GDERIIVFTTNH 347 (457)
T ss_pred ---------CCCEEEEEECCC
T ss_conf ---------873499994687