HHsearch alignment for GI: 254780271 and conserved domain: KOG2028
>KOG2028 consensus.
Probab=99.04 E-value=2e-09 Score=86.49 Aligned_cols=227 Identities=25% Similarity=0.308 Sum_probs=120.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC---EEEHHHHHH
Q ss_conf 99742030859999999999986588752121013552256835884073321769999999871853---131012211
Q gi|254780271|r 73 RVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP---FTMADATTL 149 (424)
Q Consensus 73 ~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P---F~~vdaT~~ 149 (424)
T Consensus 135 ktL~dyv-GQ~hlv~q-~gllrs~ieq-------~--~i-pS-mIlWGppG~GKTtlArlia~tsk~~SyrfvelSAt~a 201 (554)
T KOG2028 135 KTLDDYV-GQSHLVGQ-DGLLRSLIEQ-------N--RI-PS-MILWGPPGTGKTTLARLIASTSKKHSYRFVELSATNA 201 (554)
T ss_pred CHHHHHC-CHHHHCCC-CHHHHHHHHC-------C--CC-CC-EEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 3687750-53441483-2689999870-------8--88-70-5886699876588999998605777427999741456
Q ss_pred HHHHHCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf 1111035563303577887654-227765422333223332002333333443210256898875310587010256556
Q gi|254780271|r 150 TEAGYVGEDVENIILKLLQAAD-YNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228 (424)
Q Consensus 150 TE~GYvG~Dvesii~~L~~~a~-~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~g 228 (424)
T Consensus 202 ~t---------~dvR~ife~aq~~~~l~krkTilFiDEiHRFNks--------------QQD~fLP~VE~G~I~lIG--- 255 (554)
T KOG2028 202 KT---------NDVRDIFEQAQNEKSLTKRKTILFIDEIHRFNKS--------------QQDTFLPHVENGDITLIG--- 255 (554)
T ss_pred CH---------HHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHH--------------HHHCCCCEECCCCEEEEE---
T ss_conf 61---------8899999998878765244069873776553232--------------110034213067069985---
Q ss_pred CCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCC
Q ss_conf 43222430243100012322000467898876412343332111100000001689996410567775220689872078
Q gi|254780271|r 229 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLP 308 (424)
Q Consensus 229 rk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlP 308 (424)
T Consensus 256 ----------ATTENP---------------------------------------------------SFqln~aLlSRC~ 274 (554)
T KOG2028 256 ----------ATTENP---------------------------------------------------SFQLNAALLSRCR 274 (554)
T ss_pred ----------CCCCCC---------------------------------------------------CCCHHHHHHHCCC
T ss_conf ----------366897---------------------------------------------------6011277873160
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 42672111057899998742677999999998744989999689999999955106787423689999996777402767
Q gi|254780271|r 309 VLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKILLDTMFELPM 388 (424)
Q Consensus 309 iiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~iLedimFe~P~ 388 (424)
T Consensus 275 Vf-vLekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsd---GDaR~aLN~Lems~~--m~~tr~ 348 (554)
T KOG2028 275 VF-VLEKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSD---GDARAALNALEMSLS--MFCTRS 348 (554)
T ss_pred EE-EECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHH--HHHHHC
T ss_conf 66-733688899999999998763210256889998312456889999987047---318888778999999--887524
Q ss_pred CCCCCEEEECHHHHCCCC
Q ss_conf 898419998377855878
Q gi|254780271|r 389 LKGVSSVIISDDVVKGKA 406 (424)
Q Consensus 389 ~~~~~~v~Id~~~V~~~~ 406 (424)
T Consensus 349 g~~-~~~~lSidDvke~l 365 (554)
T KOG2028 349 GQS-SRVLLSIDDVKEGL 365 (554)
T ss_pred CCC-CCCEECHHHHHHHH
T ss_conf 776-56400288899998