HHsearch alignment for GI: 254780271 and conserved domain: PRK05201
>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=100.00 E-value=0 Score=816.35 Aligned_cols=298 Identities=43% Similarity=0.683 Sum_probs=269.3
Q ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEH
Q ss_conf 99878999997420308599999999999865887521210135522568358840733217699999998718531310
Q gi|254780271|r 65 IPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMA 144 (424)
Q Consensus 65 ~~tP~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~v 144 (424)
T Consensus 3 ~ltP~eIv~~LD~yIIGQ~~AKkavAVAlrNr~RR~~-l~~~lr~Ei~pkNILmIGPTGvGKTeIARrLAkl~~aPFvkv 81 (442)
T PRK05201 3 ELTPREIVSELDKYIIGQDDAKRAVAIALRNRWRRMQ-LPEELRDEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV 81 (442)
T ss_pred CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 8998999998536010827766787778877787531-662212334643168878888667899999999848985875
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHH---------------------------------------------------
Q ss_conf 12211111103556330357788765422---------------------------------------------------
Q gi|254780271|r 145 DATTLTEAGYVGEDVENIILKLLQAADYN--------------------------------------------------- 173 (424)
Q Consensus 145 daT~~TE~GYvG~Dvesii~~L~~~a~~~--------------------------------------------------- 173 (424)
T Consensus 82 eATk~TEvGYvGrDVEsiIrdLv~~a~~~~k~~~~~~v~~~A~~~a~~ril~~L~~~~~~~~~~~~~~~~~~~tre~~r~ 161 (442)
T PRK05201 82 EATKFTEVGYVGRDVESIIRDLVEIAVKMVREEKREKVREKAEEAAEERILDALLPPAKNNWGEEEEEEESSATRQKFRK 161 (442)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 21310003435643788999999999999999999999999999999999998558655555554542023678999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780271|r 174 -------------------------------------------------------------------------------- 173 (424)
Q Consensus 174 -------------------------------------------------------------------------------- 173 (424)
T Consensus 162 ~Lr~G~Ldd~~IeIev~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~kkr~~tVkeA~~iL~~eEa~klid~d~v~~e 241 (442)
T PRK05201 162 KLREGELDDKEIEIEVADAPGVEIMGPPGMEEMGNQLQDMFGNLGPKKKKKRKLKVKEARKLLIEEEAAKLVDQEEIKQE 241 (442)
T ss_pred HHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 98658866555788615777777778875155666799876402788874046469999999999999862488999999
Q ss_pred -HHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHCC
Q ss_conf -7765-42233322333200233333344321025689887531058701025655643222430243100012322000
Q gi|254780271|r 174 -VERA-QRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFICGGA 251 (424)
Q Consensus 174 -v~~a-~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilfi~~ga 251 (424)
T Consensus 242 Ai~~aEq~GIVFIDEIDKIa~~~~~--~g~DVS~EGVQrdLLpivEGt~V~tK-----------~G~V~TdhILFIasGA 308 (442)
T PRK05201 242 AIERVEQNGIVFIDEIDKIAKRGEG--SGPDVSREGVQRDLLPLVEGSTVSTK-----------YGMVKTDHILFIASGA 308 (442)
T ss_pred HHHHHHHCCCEEECHHHHHHCCCCC--CCCCCCCHHHHHHHHHHHCCCCCCCC-----------CCCCCCCEEEEECCCC
T ss_conf 9998876170451146565303578--89897733078887887538855567-----------7760255034550450
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 46789887641234333211110000000168999641056777522068987207842672111057899998742677
Q gi|254780271|r 252 FAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNA 331 (424)
Q Consensus 252 f~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlPiiV~L~~Lt~edl~rILtepkns 331 (424)
T Consensus 309 Fh----------------------------------~s-----KPSDLIPEl~GRlPv~v~L~~L~~~dl~~ILtepkns 349 (442)
T PRK05201 309 FH----------------------------------VA-----KPSDLIPELQGRFPIRVELDALTEEDFVRILTEPKAS 349 (442)
T ss_pred CC----------------------------------CC-----CCCHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCHH
T ss_conf 01----------------------------------47-----8202249871755058882449999999996786157
Q ss_pred HHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCC
Q ss_conf 99999999874498999968999999995510-----6787423689999996777402767898419998377855878
Q gi|254780271|r 332 LIKQYQCLFDMEDVELVFHEDALREIARCAIA-----HKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKGKA 406 (424)
Q Consensus 332 LikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~-----~niGAR~LrtIiE~iLedimFe~P~~~~~~~v~Id~~~V~~~~ 406 (424)
T Consensus 350 L~kQy~~Lf~~egv~L~Ft~~Al~~IA~~A~~~n~~~~~iGAR~L~tI~E~vl~d~~Fe~p~~~~-~~v~I~~~~V~~~l 428 (442)
T PRK05201 350 LIKQYQALLATEGVTLEFTDDAIRRIAEIAYQVNEKTENIGARRLHTVMEKLLEDISFEAPDRSG-EKITIDAAYVDEKL 428 (442)
T ss_pred HHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-CEEEECHHHHHHHH
T ss_conf 89999999862496799847999999999998514476677378899999998986146889999-77998899999999
Q ss_pred CEEEEECCCC
Q ss_conf 8168725651
Q gi|254780271|r 407 CPLNVYTDRR 416 (424)
Q Consensus 407 ~p~~~~~~~~ 416 (424)
T Consensus 429 ~~i~~~~Dls 438 (442)
T PRK05201 429 GDLVKDEDLS 438 (442)
T ss_pred HHHHHCCCCH
T ss_conf 8876355605