HHsearch alignment for GI: 254780271 and conserved domain: PRK05342
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=100.00 E-value=0 Score=1094.29 Aligned_cols=406 Identities=72% Similarity=1.120 Sum_probs=392.4
Q ss_pred CCCCCEEEECCCCCCHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 88767256168988865742211389913431799999999898742100000026998789999974203085999999
Q gi|254780271|r 9 SVSKNALYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSITKSHEGIPNPQEILRVLDEYVIGQGQAKKV 88 (424)
Q Consensus 9 ~~~~~~~~CsfCg~~~~~v~~li~g~~~~iC~~Ci~~~~~i~~~e~~~~~~~~~~~~~tP~eI~~~Ld~yVIGQ~~AKka 88 (424)
T Consensus 4 ~~~~~~~~CsfCgk~~~~v~~li~g~~~~IC~~Cv~~~~~i~~~~~~~~~~~~~~~lp~P~eI~~~LD~yVIGQ~~AKk~ 83 (411)
T PRK05342 4 GDSKKLLYCSFCGKSQHEVRKLIAGPGVYICDECIELCNEIIREELEESAEKELSELPTPKEIKAHLDQYVIGQERAKKV 83 (411)
T ss_pred CCCCCEEEECCCCCCHHHHCEEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
T ss_conf 88996388089999854403055089848728999999999997531243332346999799999862140284888899
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 999998658875212-1013552256835884073321769999999871853131012211111103556330357788
Q gi|254780271|r 89 LAVAVHNHYKRLAHS-SKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLL 167 (424)
Q Consensus 89 vAvAv~nh~rR~~~~-~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~ 167 (424)
T Consensus 84 lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~vPF~iaDAT~lTEaGYVGeDVE~ii~~Ll 163 (411)
T PRK05342 84 LSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILLKLL 163 (411)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHHHHHH
T ss_conf 99999999999860213356652134538998999977889999999986999899861200126745607999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 76542277654223332233320023333334432102568988753105870102565564322243024310001232
Q gi|254780271|r 168 QAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFI 247 (424)
Q Consensus 168 ~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilfi 247 (424)
T Consensus 164 q~Ad~dve~Ae~GIV~IDEIDKIarks~~~s~trDVSgEGVQqaLLkiiEGt~v~vp~~ggrkhp~~~~~~idT~nILFI 243 (411)
T PRK05342 164 QAADYDVEKAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQEFIQVDTTNILFI 243 (411)
T ss_pred HHCCCCHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEECCCEEEE
T ss_conf 98288899883682888502345424788888777651248999999875871411888777787765167614717999
Q ss_pred HHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 20004678988764123433321111000000016899964105677752206898720784267211105789999874
Q gi|254780271|r 248 CGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSE 327 (424)
Q Consensus 248 ~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlPiiV~L~~Lt~edl~rILte 327 (424)
T Consensus 244 ~gGAF~GL~~II~~R~~~~~iGF~~~~~~~~~~~~~~~l~~v~p~DLi~fGlIPEfiGRlPViv~L~~L~~~~L~~ILte 323 (411)
T PRK05342 244 CGGAFDGLEKIIKQRLGKSGIGFGAEVKSKDEKDLGELLAQVEPEDLVKFGLIPEFIGRLPVVATLEELDEEALVRILTE 323 (411)
T ss_pred ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCHHHHCCCCEEEECCCCCHHHHHHHHCC
T ss_conf 11553358999986357887677887664110005678762798788873883776146640546244799999999658
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCC
Q ss_conf 26779999999987449899996899999999551067874236899999967774027678984199983778558788
Q gi|254780271|r 328 PKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKGKAC 407 (424)
Q Consensus 328 pknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~iLedimFe~P~~~~~~~v~Id~~~V~~~~~ 407 (424)
T Consensus 324 PkNaLikQY~~LF~~dgV~L~Ft~~AL~~IA~~A~~~~tGARgLRsIlE~iLld~MFelPs~~~v~~v~It~~~V~~~~~ 403 (411)
T PRK05342 324 PKNALVKQYQKLFEMDGVELEFTDDALEAIAKKAIERKTGARGLRSILEEVLLDVMFELPSREDVEKVVITEEVVEGKSK 403 (411)
T ss_pred CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHCCCCC
T ss_conf 74159999999997549679986899999999999847574577999999978875448898997099988799779998
Q ss_pred EEEEECC
Q ss_conf 1687256
Q gi|254780271|r 408 PLNVYTD 414 (424)
Q Consensus 408 p~~~~~~ 414 (424)
T Consensus 404 P~~~~~~ 410 (411)
T PRK05342 404 PLLIYKS 410 (411)
T ss_pred CEEEECC
T ss_conf 2698417