HHsearch alignment for GI: 254780271 and conserved domain: PRK05563

Probab=99.21  E-value=1.5e-10  Score=94.48  Aligned_cols=111  Identities=25%  Similarity=0.433  Sum_probs=75.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE-------EHH-HHHHH
Q ss_conf             3085999999999998658875212101355225683588407332176999999987185313-------101-22111
Q gi|254780271|r   79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFT-------MAD-ATTLT  150 (424)
Q Consensus        79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~-------~vd-aT~~T  150 (424)
T Consensus        18 vvgQ~~v~~~L~n~i~~~--~------------i~hayLf~GprG~GKTs~Ari~akalnc~~~~~~~pC~~C~~C~~i~   83 (541)
T PRK05563         18 VVGQEHITTTLKNQIINN--R------------IAHAYLFCGTRGTGKTSTAKIFAKAVNCLNPQDGEPCNECEICKKIN   83 (541)
T ss_pred             HCCCHHHHHHHHHHHHCC--C------------CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf             248499999999999849--9------------32045303879958999999999995799988898575148899985


Q ss_pred             HHHHC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             11103----------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r  151 EAGYV----------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       151 E~GYv----------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        84 ~-g~~~Dv~Eidaas~~gvd-~iR~~~~~~~~~p~~~~~Kv~IiDEvhmls~--------------~a~nallKtlEeP  146 (541)
T PRK05563         84 E-GLLMDVIEIDAASNNGVD-DIREIIENVKYPPQEGKYKVYIMDEVHMLSQ--------------GAVNAFLKTLEEP  146 (541)
T ss_pred             C-CCCCCEEEECCCCCCCHH-HHHHHHHHCEECCCCCCEEEEEEECCCCCCH--------------HHHHHHHHHHHCC
T ss_conf             6-898873662444447889-9999997610487678705999977233899--------------9999999998548