HHsearch alignment for GI: 254780271 and conserved domain: PRK06090

Probab=97.91  E-value=3e-05  Score=57.36  Aligned_cols=94  Identities=18%  Similarity=0.253  Sum_probs=58.5

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHCC------CEEEHHHHHHHHHHHCCC------C--CCCH----HHHHHHHHHHH
Q ss_conf             5683588407332176999999987185------313101221111110355------6--3303----57788765422
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARIIDV------PFTMADATTLTEAGYVGE------D--VENI----ILKLLQAADYN  173 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l~~------PF~~vdaT~~TE~GYvG~------D--vesi----i~~L~~~a~~~  173 (424)
T Consensus        24 l~HA~L~~g~~G~Gk~~la~~la~~LlC~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~pe~~~k~I~vd~IR~l~~~~~~~  103 (319)
T PRK06090         24 IPGALLLQSDEGLGVESLVELFSHALLCQNYQSEACGFCHSCELMKSGNHPDLHVIKPEKEGKSITVEQIRQCNRLAQES  103 (319)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             63067667999857999999999998089999998877877999875899982366123356768799999999997545


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             7765422333223332002333333443210256898875310587
Q gi|254780271|r  174 VERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       174 v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus       104 ~~~g~~KV~iI~~ae~m~~--------------~AaNALLKtLEEP  135 (319)
T PRK06090        104 SQLGGYRLFVIEPADAMNE--------------SASNALLKTLEEP  135 (319)
T ss_pred             CCCCCCEEEEECCHHHCCH--------------HHHHHHHHHHCCC
T ss_conf             2106936999814443499--------------9999999984289