HHsearch alignment for GI: 254780271 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.24 E-value=2e-10 Score=93.49 Aligned_cols=112 Identities=21% Similarity=0.299 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCE-------EEHHHHHHHH
Q ss_conf 308599999999999865887521210135522568358840733217699999998718531-------3101221111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPF-------TMADATTLTE 151 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF-------~~vdaT~~TE 151 (424)
T Consensus 18 vvGQe~vv~~L~nai~~~--r------------l~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~i~ 83 (560)
T PRK06647 18 LEGQDFVVETLKHSIEKN--K------------IANAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKSID 83 (560)
T ss_pred HCCCHHHHHHHHHHHHCC--C------------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 039499999999999749--9------------77436632899878999999999996599999988887887888874
Q ss_pred HHHC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 1103----------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 152 AGYV----------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 152 ~GYv----------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 84 ~g~~~DviEidaasn~~Vdd-IR~l~e~v~~~P~~~~yKV~IIDEahmLt~~--------------A~NALLKtLEEP 146 (560)
T PRK06647 84 NDSSLDVIEIDGASNTSVQD-VRQIKEEIMFPPASSRYRVYIIDEVHMLSNS--------------AFNALLKTIEEP 146 (560)
T ss_pred CCCCCCEEEECCCCCCCHHH-HHHHHHHHCCCCCCCCEEEEEECCHHHCCHH--------------HHHHHHHHHHCC
T ss_conf 59998757643645488899-9999998632876687069996465655999--------------999999986348