HHsearch alignment for GI: 254780271 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.13 E-value=4e-10 Score=91.44 Aligned_cols=106 Identities=28% Similarity=0.439 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC------------------
Q ss_conf 30859999999999986588752121013552256835884073321769999999871853------------------
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP------------------ 140 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P------------------ 140 (424)
T Consensus 18 ~vGQ~~v~~~l~nal~~~--rl------------~haylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg~C~~C~~i~ 83 (816)
T PRK07003 18 LVGQEHVVRALTHALDGG--RL------------HHAYLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCGVCRACREID 83 (816)
T ss_pred HCCCHHHHHHHHHHHHCC--CC------------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 238499999999999709--86------------3147511789888889999999986789999989787755578775
Q ss_pred ------EEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf ------13101221111110355633035778876542277654223332233320023333334432102568988753
Q gi|254780271|r 141 ------FTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLK 214 (424)
Q Consensus 141 ------F~~vdaT~~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLk 214 (424)
T Consensus 84 ~g~~~d~iEiDaAS~~-------~vd~-~r~l~~~~~y~p~~~r~KvyiiDEvHmls~~--------------afnalLK 141 (816)
T PRK07003 84 EGRFVDYVEMDAASNR-------GVDE-MAALLERAVYAPVDARFKVYMIDEVHMLTNH--------------AFNAMLK 141 (816)
T ss_pred CCCCCCEEEEECCCCC-------CHHH-HHHHHHHCCCCCCCCCEEEEEEECHHHCCHH--------------HHHHHHH
T ss_conf 5887754786355435-------7689-9999986224786674479998415433999--------------9999998
Q ss_pred HCCCCE
Q ss_conf 105870
Q gi|254780271|r 215 IMEGTI 220 (424)
Q Consensus 215 ileg~~ 220 (424)
T Consensus 142 tlEepP 147 (816)
T PRK07003 142 TLEEPP 147 (816)
T ss_pred HHCCCC
T ss_conf 403798