HHsearch alignment for GI: 254780271 and conserved domain: PRK07276

>PRK07276 DNA polymerase III subunit delta'; Validated.
Probab=96.66  E-value=0.0052  Score=41.67  Aligned_cols=91  Identities=21%  Similarity=0.248  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHH------HHHCCCCCCCH----HHHHHHHHHHHHH
Q ss_conf             683588407332176999999987185-------313101221111------11035563303----5778876542277
Q gi|254780271|r  113 KSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTE------AGYVGEDVENI----ILKLLQAADYNVE  175 (424)
Q Consensus       113 ~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE------~GYvG~Dvesi----i~~L~~~a~~~v~  175 (424)
T Consensus        24 ~HAyLf~G--~~Gk~~~A~~~A~~l~C~~~~~~~pCg~C~~C~~i~~~~hpDv~~i~~~~~~I~vd~IR~l~~~~~~~~~  101 (290)
T PRK07276         24 NHAYLFSG--DFASFEMALFLAQSLFCEQKEDVLPCGHCRSCRLIEQGDFSDVTVIEPQGQVIKTDTIRELTANFSQSGY  101 (290)
T ss_pred             CEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             50542169--8687999999999981899999898988999999876999871377167775768899999999844561


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             65422333223332002333333443210256898875310587
Q gi|254780271|r  176 RAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       176 ~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus       102 ~g~~KV~II~~Ad~mt~--------------~AaNaLLK~LEEP  131 (290)
T PRK07276        102 EGKRQVFIIKDADKMHV--------------NAANSLLKVIEEP  131 (290)
T ss_pred             CCCEEEEEECCHHHCCH--------------HHHHHHHHHHCCC
T ss_conf             37827999776565299--------------9999999970389