HHsearch alignment for GI: 254780271 and conserved domain: PRK07276
>PRK07276 DNA polymerase III subunit delta'; Validated.
Probab=96.66 E-value=0.0052 Score=41.67 Aligned_cols=91 Identities=21% Similarity=0.248 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHH------HHHCCCCCCCH----HHHHHHHHHHHHH
Q ss_conf 683588407332176999999987185-------313101221111------11035563303----5778876542277
Q gi|254780271|r 113 KSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTE------AGYVGEDVENI----ILKLLQAADYNVE 175 (424)
Q Consensus 113 ~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE------~GYvG~Dvesi----i~~L~~~a~~~v~ 175 (424)
T Consensus 24 ~HAyLf~G--~~Gk~~~A~~~A~~l~C~~~~~~~pCg~C~~C~~i~~~~hpDv~~i~~~~~~I~vd~IR~l~~~~~~~~~ 101 (290)
T PRK07276 24 NHAYLFSG--DFASFEMALFLAQSLFCEQKEDVLPCGHCRSCRLIEQGDFSDVTVIEPQGQVIKTDTIRELTANFSQSGY 101 (290)
T ss_pred CEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 50542169--8687999999999981899999898988999999876999871377167775768899999999844561
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 65422333223332002333333443210256898875310587
Q gi|254780271|r 176 RAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 176 ~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 102 ~g~~KV~II~~Ad~mt~--------------~AaNaLLK~LEEP 131 (290)
T PRK07276 102 EGKRQVFIIKDADKMHV--------------NAANSLLKVIEEP 131 (290)
T ss_pred CCCEEEEEECCHHHCCH--------------HHHHHHHHHHCCC
T ss_conf 37827999776565299--------------9999999970389