HHsearch alignment for GI: 254780271 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.

Probab=97.62  E-value=7.6e-05  Score=54.51  Aligned_cols=47  Identities=30%  Similarity=0.523  Sum_probs=39.2

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCH
Q ss_conf             358840733217699999998718531310122111111035563303
Q gi|254780271|r  115 NILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENI  162 (424)
Q Consensus       115 NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesi  162 (424)
T Consensus         3 rI~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~-l~w~~~w~~~~~~e~   49 (167)
T PRK08118          3 KIILIGSGGSGKSTLARQLGEKLNIPVHHLDA-LFWKPNWEGVPKEEQ   49 (167)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEECCC-EEECCCCCCCCHHHH
T ss_conf             79998899987999999999988969796443-476689946888999