HHsearch alignment for GI: 254780271 and conserved domain: PRK08770

Probab=98.94  E-value=1.1e-08  Score=81.28  Aligned_cols=113  Identities=26%  Similarity=0.467  Sum_probs=80.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHH-HHHHH
Q ss_conf             3085999999999998658875212101355225683588407332176999999987185-------313101-22111
Q gi|254780271|r   79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMAD-ATTLT  150 (424)
Q Consensus        79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vd-aT~~T  150 (424)
T Consensus        18 ~~gq~~~~~~l~~~~~~~--~~------------~~a~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~c~~c~~i~   83 (663)
T PRK08770         18 LVGQEHVVRALSNALDSG--RV------------HHAFLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQCPACLDID   83 (663)
T ss_pred             HCCCHHHHHHHHHHHHCC--CC------------CEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf             228599999999999709--97------------4047622799888889999999986789999999787787789885


Q ss_pred             HHHHC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf             11103---------55633035778876542277654223332233320023333334432102568988753105870
Q gi|254780271|r  151 EAGYV---------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTI  220 (424)
Q Consensus       151 E~GYv---------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~  220 (424)
T Consensus        84 ~~~~~d~~e~daas~~~v~~-~r~~~~~~~~~p~~~~~kvy~idevhmls~~--------------~fna~lktleepp  147 (663)
T PRK08770         84 AGRYIDLLEIDAASNTGVDD-VREVIENAQYMPSRGKFKVYLIDEVHMLSKA--------------AFNALLKTLEEPP  147 (663)
T ss_pred             CCCCCCEEEEECCCCCCHHH-HHHHHHHCCCCCCCCCEEEEEEECHHHCCHH--------------HHHHHHHHHCCCC
T ss_conf             48988658864676588899-9999984435887774369997004332899--------------9999987402786