HHsearch alignment for GI: 254780271 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.03 E-value=3e-09 Score=85.28 Aligned_cols=112 Identities=30% Similarity=0.475 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHH-HHHHH
Q ss_conf 3085999999999998658875212101355225683588407332176999999987185-------313101-22111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMAD-ATTLT 150 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vd-aT~~T 150 (424)
T Consensus 18 ~vGQ~~v~~~L~nal~~~--rl------------~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~ 83 (717)
T PRK08853 18 VVGQSHVLTALENALAHN--RL------------HHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEID 83 (717)
T ss_pred HCCCHHHHHHHHHHHHCC--CC------------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 138599999999999709--97------------4057610889888989999999986789999999788870267674
Q ss_pred HHHHC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 11103---------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 151 EAGYV---------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 151 E~GYv---------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 84 ~g~~~d~~EiDaAs~~~vdd-~rel~~~~~y~p~~~~yKvyiiDEvHmls~~--------------afnAlLKtlEEP 146 (717)
T PRK08853 84 EGRFVDLLEIDAASRTKVED-TRELLDNVQYKPARGRFKVYLIDEVHMLSRH--------------SFNALLKTLEEP 146 (717)
T ss_pred CCCCCCEEEECCCCCCCHHH-HHHHHHHCCCCCCCCCEEEEEEECHHHCCHH--------------HHHHHHHHHCCC
T ss_conf 47877524540565678899-9999985554887785479998305443899--------------999998760378