HHsearch alignment for GI: 254780271 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.82 E-value=4.3e-08 Score=77.22 Aligned_cols=113 Identities=28% Similarity=0.398 Sum_probs=77.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC------------EEEHH-
Q ss_conf 30859999999999986588752121013552256835884073321769999999871853------------13101-
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP------------FTMAD- 145 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P------------F~~vd- 145 (424)
T Consensus 25 ~~gq~~~~~~l~~~~~~~--~------------~~~a~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~ 90 (600)
T PRK09111 25 LIGQEAMVRTLRNAFETG--R------------IAQAFMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEH 90 (600)
T ss_pred HCCCHHHHHHHHHHHHCC--C------------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 338599999999999729--8------------42047645789878999999999996698876668998898998865
Q ss_pred HHHHHHHHHC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 2211111103---------5563303577887654227765422333223332002333333443210256898875310
Q gi|254780271|r 146 ATTLTEAGYV---------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIM 216 (424)
Q Consensus 146 aT~~TE~GYv---------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkil 216 (424)
T Consensus 91 c~~i~~~~~~d~~e~daas~~~v~~-~r~~~~~~~~~p~~~~~kv~iidevhmls~~--------------afnallktl 155 (600)
T PRK09111 91 CQAIMEGRHVDVIEMDAASHTGVDD-IREIIESVRYRPVSARYKVYIIDEVHMLSTA--------------AFNALLKTL 155 (600)
T ss_pred HHHHHCCCCCCEEEEECCCCCCHHH-HHHHHHHHCCCCCCCCEEEEEEECCCCCCHH--------------HHHHHHHHH
T ss_conf 8988668998758851554578889-9999986053887775469996001105799--------------999999876
Q ss_pred CCCE
Q ss_conf 5870
Q gi|254780271|r 217 EGTI 220 (424)
Q Consensus 217 eg~~ 220 (424)
T Consensus 156 eepp 159 (600)
T PRK09111 156 EEPP 159 (600)
T ss_pred HCCC
T ss_conf 2598