HHsearch alignment for GI: 254780271 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=94.07  E-value=0.04  Score=35.46  Aligned_cols=51  Identities=16%  Similarity=0.138  Sum_probs=34.3

Q ss_pred             HHHHHCCCCEEEECCCCHHHHHHHHHHHH-HHHHHHHHHHHHHCCCEEEECHHH
Q ss_conf             89872078426721110578999987426-779999999987449899996899
Q gi|254780271|r  301 PEFIGRLPVLATLEDLDENSLIRILSEPK-NALIKQYQCLFDMEDVELVFHEDA  353 (424)
Q Consensus       301 PEl~GRlPiiV~L~~Lt~edl~rILtepk-nsLikQy~~Ll~~egV~L~FtdeA  353 (424)
T Consensus       350 ~~v~~~~~~rVvIDsls~--~~~~~~~~~~r~~l~~L~~~Lk~~gvT~l~t~~~  401 (501)
T PRK09302        350 REIEEFKPSRVAVDPLSA--LARGGSLNEFRQFVIRLTDYLKQEEITGLFTNLT  401 (501)
T ss_pred             HHHHHCCCCEEEECCHHH--HHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             999972998999958068--7652685999999999999997689789997612