HHsearch alignment for GI: 254780271 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=94.07 E-value=0.04 Score=35.46 Aligned_cols=51 Identities=16% Similarity=0.138 Sum_probs=34.3
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHH-HHHHHHHHHHHHHCCCEEEECHHH
Q ss_conf 89872078426721110578999987426-779999999987449899996899
Q gi|254780271|r 301 PEFIGRLPVLATLEDLDENSLIRILSEPK-NALIKQYQCLFDMEDVELVFHEDA 353 (424)
Q Consensus 301 PEl~GRlPiiV~L~~Lt~edl~rILtepk-nsLikQy~~Ll~~egV~L~FtdeA 353 (424)
T Consensus 350 ~~v~~~~~~rVvIDsls~--~~~~~~~~~~r~~l~~L~~~Lk~~gvT~l~t~~~ 401 (501)
T PRK09302 350 REIEEFKPSRVAVDPLSA--LARGGSLNEFRQFVIRLTDYLKQEEITGLFTNLT 401 (501)
T ss_pred HHHHHCCCCEEEECCHHH--HHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 999972998999958068--7652685999999999999997689789997612