HHsearch alignment for GI: 254780271 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=99.08 E-value=2.1e-09 Score=86.42 Aligned_cols=211 Identities=18% Similarity=0.281 Sum_probs=132.7
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH---HCCCEEEHHHHHHHHH-
Q ss_conf 203085999999999998658875212101355225683588407332176999999987---1853131012211111-
Q gi|254780271|r 77 EYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARI---IDVPFTMADATTLTEA- 152 (424)
Q Consensus 77 ~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~---l~~PF~~vdaT~~TE~- 152 (424)
T Consensus 204 ~~iig~S~~m~~v~----~~a~r~A---------~~d~pVLI~GEsGTGKellAraIH~~S~R~~~pFv~vnC~alp~~l 270 (513)
T PRK10820 204 SQIVAVSPKMKHVV----EQARKLA---------MLSAPLLITGDTGTGKDLFAYACHLASPRAKKPYLALNCASIPEDA 270 (513)
T ss_pred HHHEECCHHHHHHH----HHHHHHH---------CCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH
T ss_conf 77510899999999----9999985---------9899889989898249999999996688789982688899899678
Q ss_pred ------HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCC
Q ss_conf ------10355633035778876542277654223332233320023333334432102568988753105870102565
Q gi|254780271|r 153 ------GYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226 (424)
Q Consensus 153 ------GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~ 226 (424)
T Consensus 271 ~eseLFG~a~~-----------~~~G~fe~A~gGTLfLdEI~~l~~~--------------~Q~kLLr~Lq~~~~~--rv 323 (513)
T PRK10820 271 VESELFGHAPE-----------GKKGFFEQANGGSVLLDEIGEMSPR--------------MQAKLLRFLNDGTFR--RV 323 (513)
T ss_pred HHHHHCCCCCC-----------CCCCCEEECCCCEEEEECHHHCCHH--------------HHHHHHHHHHCCEEE--EC
T ss_conf 99986387666-----------8897557858988999783659999--------------999999998689799--65
Q ss_pred CCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHC
Q ss_conf 56432224302431000123220004678988764123433321111000000016899964105677752206898720
Q gi|254780271|r 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGR 306 (424)
Q Consensus 227 ~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GR 306 (424)
T Consensus 324 G~~~~~~~dvRiIaaT~~---------dL~~---------------------------lv~~g--------~FReDLyyR 359 (513)
T PRK10820 324 GEDHEVHVDVRVICATQK---------NLVE---------------------------LVQKG--------LFREDLYYR 359 (513)
T ss_pred CCCCEEEEEEEEEECCCH---------HHHH---------------------------HHHCC--------CCCHHHHHH
T ss_conf 998535677899962653---------0999---------------------------98729--------850889998
Q ss_pred CCCE-EEECCCCH--HHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 7842-67211105--7899998742677999999998744989-9996899999999551067874236899999967
Q gi|254780271|r 307 LPVL-ATLEDLDE--NSLIRILSEPKNALIKQYQCLFDMEDVE-LVFHEDALREIARCAIAHKTGARGLRSILEKILL 380 (424)
Q Consensus 307 lPii-V~L~~Lt~--edl~rILtepknsLikQy~~Ll~~egV~-L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~iLe 380 (424)
T Consensus 360 L~v~~I~lPpLReR~eDI~~L~----~~fl~~~~~~~---g~~~~~ls~~a~~~L~~y~WPGN--VREL~n~iera~~ 428 (513)
T PRK10820 360 LNVLTLNLPPLRDCPQDIMPLT----ELFVARFADEQ---GVPRPKLSADLSTVLTRYGWPGN--VRQLKNAIYRALT 428 (513)
T ss_pred HHCCCCCCCCHHHCHHHHHHHH----HHHHHHHHHHC---CCCCCCCCHHHHHHHHHCCCCCH--HHHHHHHHHHHHH
T ss_conf 6167255888344655699999----99999999975---99989847999999970899979--9999999999999