HHsearch alignment for GI: 254780271 and conserved domain: PRK10867

Probab=95.77  E-value=0.042  Score=35.27  Aligned_cols=106  Identities=21%  Similarity=0.303  Sum_probs=56.2

Q ss_pred             CCCHHHHHHHHHHHCCCHHHHH-----HHHHHHHHHHHHHHHCCC-CCCCCC-CCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             9987899999742030859999-----999999986588752121-013552-256835884073321769999999871
Q gi|254780271|r   65 IPNPQEILRVLDEYVIGQGQAK-----KVLAVAVHNHYKRLAHSS-KSSNVE-LAKSNILLVGPTGCGKTYLAQTLARII  137 (424)
Q Consensus        65 ~~tP~eI~~~Ld~yVIGQ~~AK-----kavAvAv~nh~rR~~~~~-~~~~~e-i~~~NILliGPTGvGKTelAr~LAk~l  137 (424)
T Consensus        45 ~~vvk~~i~~vke~~~g~~v~~~l~p~q~i~kiv~~eL~~lLg~~~~~l~~~~~~p~VIm~vGLqGsGKTTT~aKLA~~l  124 (453)
T PRK10867         45 LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFL  124 (453)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             79999999999999633513578988999999999999998588876663378999699997468885185899999999


Q ss_pred             C----CCEEEHHHHHHHHH------------------HHCCCCCCCHHHHHHHHH
Q ss_conf             8----53131012211111------------------103556330357788765
Q gi|254780271|r  138 D----VPFTMADATTLTEA------------------GYVGEDVENIILKLLQAA  170 (424)
Q Consensus       138 ~----~PF~~vdaT~~TE~------------------GYvG~Dvesii~~L~~~a  170 (424)
T Consensus       125 k~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~ia~~a~~~a  179 (453)
T PRK10867        125 REKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEA  179 (453)
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHH
T ss_conf             9738983798558877058999999999851980436788998899999999999