HHsearch alignment for GI: 254780271 and conserved domain: PRK11784
>PRK11784 tRNA 2-selenouridine synthase; Provisional.
Probab=96.17 E-value=0.0054 Score=41.53 Aligned_cols=25 Identities=48% Similarity=0.599 Sum_probs=21.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 2568358840733217699999998
Q gi|254780271|r 111 LAKSNILLVGPTGCGKTYLAQTLAR 135 (424)
Q Consensus 111 i~~~NILliGPTGvGKTelAr~LAk 135 (424)
T Consensus 135 l~~~~~vl~G~TG~GKT~lL~~L~~ 159 (333)
T PRK11784 135 LEEPLVVLGGMTGSGKTRLLQALAN 159 (333)
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 5468599867888778999999997