HHsearch alignment for GI: 254780271 and conserved domain: PRK13765
>PRK13765 ATP-dependent protease Lon; Provisional.
Probab=99.13 E-value=7.2e-10 Score=89.66 Aligned_cols=55 Identities=33% Similarity=0.617 Sum_probs=44.8
Q ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 0269987899999742030859999999999986588752121013552256835884073321769999999871
Q gi|254780271|r 62 HEGIPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII 137 (424)
Q Consensus 62 ~~~~~tP~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l 137 (424)
T Consensus 20 T~di~iP~~l---id-qVIGQe~Av~~i~~Aa~qr-----------------rhvlliG~PGtGKSmlakam~elL 74 (637)
T PRK13765 20 TSDIEVPKLL---ID-QVIGQEHAVEVIKKAAKQR-----------------RHVMLIGSPGTGKSMLAKAMAELL 74 (637)
T ss_pred CCCCCCCCCC---CC-CCCCHHHHHHHHHHHHHHH-----------------CCEEEECCCCCCHHHHHHHHHHHC
T ss_conf 1136689852---33-2457199999999999843-----------------738986899987999999999757