HHsearch alignment for GI: 254780271 and conserved domain: PRK13833

>PRK13833 conjugal transfer protein TrbB; Provisional.
Probab=96.29  E-value=0.0035  Score=42.86  Aligned_cols=26  Identities=42%  Similarity=0.604  Sum_probs=23.3

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             56835884073321769999999871
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARII  137 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l  137 (424)
T Consensus       143 ~r~nilVsGgTGSGKTTllnaL~~~i  168 (323)
T PRK13833        143 SRLNIVISGGTGSGKTTLANAVIAEI  168 (323)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             18968999177775689999999864