HHsearch alignment for GI: 254780271 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.

Probab=96.69  E-value=0.0013  Score=45.83  Aligned_cols=27  Identities=44%  Similarity=0.732  Sum_probs=24.6

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             568358840733217699999998718
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARIID  138 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l~  138 (424)
T Consensus       161 ~r~NIlIsGgTGSGKTTllnALl~~IP  187 (343)
T PRK13851        161 GRLTMLLCGPTGSGKTTMSKTLISAIP  187 (343)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHCCC
T ss_conf             698899988898619999999996289