HHsearch alignment for GI: 254780271 and conserved domain: PRK13853

>PRK13853 type IV secretion system protein VirB4; Provisional.

Probab=93.25  E-value=0.052  Score=34.68  Aligned_cols=23  Identities=30%  Similarity=0.408  Sum_probs=19.0

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             68358840733217699999998
Q gi|254780271|r  113 KSNILLVGPTGCGKTYLAQTLAR  135 (424)
Q Consensus       113 ~~NILliGPTGvGKTelAr~LAk  135 (424)
T Consensus       426 ~GHt~I~G~TGsGKTtll~fL~a  448 (789)
T PRK13853        426 VGMTAIFGPIGRGKTTLMTFILA  448 (789)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHH
T ss_conf             77448878999988999999999