HHsearch alignment for GI: 254780271 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=93.33 E-value=0.069 Score=33.79 Aligned_cols=25 Identities=36% Similarity=0.505 Sum_probs=17.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 3588407332176999999987185
Q gi|254780271|r 115 NILLVGPTGCGKTYLAQTLARIIDV 139 (424)
Q Consensus 115 NILliGPTGvGKTelAr~LAk~l~~ 139 (424)
T Consensus 82 lilitGptGSGKtTtl~a~l~~~~~ 106 (264)
T cd01129 82 IILVTGPTGSGKTTTLYSALSELNT 106 (264)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8999789999779999999986436