HHsearch alignment for GI: 254780271 and conserved domain: cd01385
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=93.42 E-value=0.2 Score=30.58 Aligned_cols=137 Identities=22% Similarity=0.305 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEH
Q ss_conf 99878999997420308599999999999865887521210135522568358840733217699999998718531310
Q gi|254780271|r 65 IPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMA 144 (424)
Q Consensus 65 ~~tP~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~v 144 (424)
T Consensus 55 iY~~~~~~~y~~~~~~~~-lpPHiyaiA-~~Ay~~m~~~~-------~~QsIiiSGESGaGKTe~~K~il~yL------- 118 (692)
T cd01385 55 IYNPKYVRLYENQQRLGK-LPPHIFAIA-DVAYYNMLRKK-------VNQCIVISGESGSGKTESTNFLIHHL------- 118 (692)
T ss_pred CCCHHHHHHHCCCCCCCC-CCCCHHHHH-HHHHHHHHHCC-------CCEEEEEECCCCCCHHHHHHHHHHHH-------
T ss_conf 999899998738987789-999589999-99999998739-------98289996489898789999999999-------
Q ss_pred HHHHHHHHHHCCCCCCCHHHH---HHHHHHHH--------HHHHHHHHHHHHHHHHHCCC------CCCCCCCCCCCHHH
Q ss_conf 122111111035563303577---88765422--------77654223332233320023------33333443210256
Q gi|254780271|r 145 DATTLTEAGYVGEDVENIILK---LLQAADYN--------VERAQRGIVYIDEVDKISRK------SDNPSITRDVSGEG 207 (424)
Q Consensus 145 daT~~TE~GYvG~Dvesii~~---L~~~a~~~--------v~~a~~~iv~iDEidKi~~~------~~~~~~~~dvs~~g 207 (424)
T Consensus 119 --~~~s~~~~~~~~i~~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gER 196 (692)
T cd01385 119 --TALSQKGYAGSGVEQTILSAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYRENGMVRGAVVEKYLLEKSRIVSQEKDER 196 (692)
T ss_pred --HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCC
T ss_conf --998078987760999998631699986356778998766600578999768884710278887233460031587531
Q ss_pred HHHHHHHHCCCC
Q ss_conf 898875310587
Q gi|254780271|r 208 VQQALLKIMEGT 219 (424)
Q Consensus 208 vq~~LLkileg~ 219 (424)
T Consensus 197 NfHIFYqLl~G~ 208 (692)
T cd01385 197 NYHVFYYLLLGA 208 (692)
T ss_pred HHHHHHHHHCCC
T ss_conf 277899998189