HHsearch alignment for GI: 254780271 and conserved domain: cd01385

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=93.42  E-value=0.2  Score=30.58  Aligned_cols=137  Identities=22%  Similarity=0.305  Sum_probs=67.4

Q ss_pred             CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEH
Q ss_conf             99878999997420308599999999999865887521210135522568358840733217699999998718531310
Q gi|254780271|r   65 IPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMA  144 (424)
Q Consensus        65 ~~tP~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~v  144 (424)
T Consensus        55 iY~~~~~~~y~~~~~~~~-lpPHiyaiA-~~Ay~~m~~~~-------~~QsIiiSGESGaGKTe~~K~il~yL-------  118 (692)
T cd01385          55 IYNPKYVRLYENQQRLGK-LPPHIFAIA-DVAYYNMLRKK-------VNQCIVISGESGSGKTESTNFLIHHL-------  118 (692)
T ss_pred             CCCHHHHHHHCCCCCCCC-CCCCHHHHH-HHHHHHHHHCC-------CCEEEEEECCCCCCHHHHHHHHHHHH-------
T ss_conf             999899998738987789-999589999-99999998739-------98289996489898789999999999-------


Q ss_pred             HHHHHHHHHHCCCCCCCHHHH---HHHHHHHH--------HHHHHHHHHHHHHHHHHCCC------CCCCCCCCCCCHHH
Q ss_conf             122111111035563303577---88765422--------77654223332233320023------33333443210256
Q gi|254780271|r  145 DATTLTEAGYVGEDVENIILK---LLQAADYN--------VERAQRGIVYIDEVDKISRK------SDNPSITRDVSGEG  207 (424)
Q Consensus       145 daT~~TE~GYvG~Dvesii~~---L~~~a~~~--------v~~a~~~iv~iDEidKi~~~------~~~~~~~~dvs~~g  207 (424)
T Consensus       119 --~~~s~~~~~~~~i~~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gER  196 (692)
T cd01385         119 --TALSQKGYAGSGVEQTILSAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYRENGMVRGAVVEKYLLEKSRIVSQEKDER  196 (692)
T ss_pred             --HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCC
T ss_conf             --998078987760999998631699986356778998766600578999768884710278887233460031587531


Q ss_pred             HHHHHHHHCCCC
Q ss_conf             898875310587
Q gi|254780271|r  208 VQQALLKIMEGT  219 (424)
Q Consensus       208 vq~~LLkileg~  219 (424)
T Consensus       197 NfHIFYqLl~G~  208 (692)
T cd01385         197 NYHVFYYLLLGA  208 (692)
T ss_pred             HHHHHHHHHCCC
T ss_conf             277899998189