HHsearch alignment for GI: 254780271 and conserved domain: cd03226
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=93.75 E-value=0.041 Score=35.40 Aligned_cols=32 Identities=41% Similarity=0.592 Sum_probs=24.1
Q ss_pred CCCCCCCCC-EEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 355225683-58840733217699999998718
Q gi|254780271|r 107 SNVELAKSN-ILLVGPTGCGKTYLAQTLARIID 138 (424)
Q Consensus 107 ~~~ei~~~N-ILliGPTGvGKTelAr~LAk~l~ 138 (424)
T Consensus 19 vsl~i~~Gei~~iiG~nGaGKSTLl~~i~Gl~~ 51 (205)
T cd03226 19 LSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK 51 (205)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 378886998999988999989999999956857