>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=93.66  E-value=0.044  Score=35.18  Aligned_cols=24  Identities=38%  Similarity=0.652  Sum_probs=21.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             588407332176999999987185
Q gi|254780271|r  116 ILLVGPTGCGKTYLAQTLARIIDV  139 (424)
Q Consensus       116 ILliGPTGvGKTelAr~LAk~l~~  139 (424)
T Consensus        28 v~liGpNGaGKSTLlk~l~Gll~p   51 (246)
T cd03237          28 IGILGPNGIGKTTFIKMLAGVLKP   51 (246)
T ss_pred             EEEECCCCCHHHHHHHHHHCCCCC
T ss_conf             999979997699999999778788