HHsearch alignment for GI: 254780271 and conserved domain: pfam00308

Probab=98.20  E-value=4.8e-05  Score=55.86  Aligned_cols=200  Identities=18%  Similarity=0.253  Sum_probs=109.2

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-EEEEECCCCCHHHHHHHHHHHHC--CC---EEEHHHHH
Q ss_conf             74203085999999999998658875212101355225683-58840733217699999998718--53---13101221
Q gi|254780271|r   75 LDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSN-ILLVGPTGCGKTYLAQTLARIID--VP---FTMADATT  148 (424)
Q Consensus        75 Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~N-ILliGPTGvGKTelAr~LAk~l~--~P---F~~vdaT~  148 (424)
T Consensus         7 FdnF~vg~~N---~~a~~~~~~i~~--~~~-------~~~npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~~~~   74 (219)
T pfam00308         7 FENFVIGSSN---RFAHAAALAVAE--APG-------KAYNPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLTSEE   74 (219)
T ss_pred             CCCCCCCCCH---HHHHHHHHHHHH--CCC-------CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHH
T ss_conf             1020236838---999999999996--758-------7678269988999988899999999999849998288843999


Q ss_pred             HHHHHH---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
Q ss_conf             111110---35563303577887654227765422333223332002333333443210256898875310587010256
Q gi|254780271|r  149 LTEAGY---VGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPP  225 (424)
Q Consensus       149 ~TE~GY---vG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~  225 (424)
T Consensus        75 ~~~~~~~~l~~~~~~~f~----------~~l~~~d~l~iDDi~~l~~~------------~~~ee~lf~l~N~~~----~  128 (219)
T pfam00308        75 FLNDFVDALRDNKIEAFK----------KSYRNVDLLLIDDIQFLAGK------------EKTQEEFFHTFNALH----E  128 (219)
T ss_pred             HHHHHHHHHHCCCHHHHH----------HHHHHCCHHHHCCHHHHCCC------------HHHHHHHHHHHHHHH----H
T ss_conf             999889999818888999----------99763233652236765686------------478999999999999----7


Q ss_pred             CCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf             55643222430243100012322000467898876412343332111100000001689996410567775220689872
Q gi|254780271|r  226 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIG  305 (424)
Q Consensus       226 ~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~G  305 (424)
T Consensus       129 --------~~~~lllts~~---------------------------------------------~p~~l~--~~~~dL~S  153 (219)
T pfam00308       129 --------NNKQIVLTSDR---------------------------------------------PPKELE--GFEDRLRS  153 (219)
T ss_pred             --------CCCEEEEECCC---------------------------------------------CCCCCC--CCCHHHHH
T ss_conf             --------29869997799---------------------------------------------810024--53277999


Q ss_pred             CC--CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             07--8426721110578999987426779999999987449899996899999999551067874236899999967774
Q gi|254780271|r  306 RL--PVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKILLDTM  383 (424)
Q Consensus       306 Rl--PiiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~iLedim  383 (424)
T Consensus       154 RL~~g~~~~i~~pdd~~~~~iL~-----------~~a~~r~l~--l~~~v~~yl~~r~~R---~~r~L~~~L~~L~~~~~  217 (219)
T pfam00308       154 RFEWGLIIAIEPPDLETRLAILR-----------KKAEEENIN--IPNEVLNFIAQRITD---NVRELEGALNRLLAFAS  217 (219)
T ss_pred             HHHCCEEEECCCCCHHHHHHHHH-----------HHHHHCCCC--CCHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHC
T ss_conf             98687566116999999999999-----------999984999--999999999984279---89999999999998550