HHsearch alignment for GI: 254780271 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=95.08 E-value=0.016 Score=38.18 Aligned_cols=22 Identities=59% Similarity=1.016 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 5884073321769999999871
Q gi|254780271|r 116 ILLVGPTGCGKTYLAQTLARII 137 (424)
Q Consensus 116 ILliGPTGvGKTelAr~LAk~l 137 (424)
T Consensus 1 i~l~G~~G~GKS~~a~~la~~~ 22 (105)
T pfam00910 1 IWLYGPPGCGKSTLAKYLARAL 22 (105)
T ss_pred CEEECCCCCCHHHHHHHHHHHH
T ss_conf 9897999898899999999999