RPSBLAST alignment for GI: 254780271 and conserved domain: COG1220

>gnl|CDD|31413 COG1220, HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones]. Length = 444

 Score =  137 bits (346), Expect = 7e-33
 Identities = 87/255 (34%), Positives = 118/255 (46%), Gaps = 60/255 (23%)

Query: 165 KLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVP 224
           ++ Q A    E  Q GIV+IDE+DKI+++  +     DVS EGVQ+ LL ++EG+  S  
Sbjct: 239 EIKQEAIDAAE--QNGIVFIDEIDKIAKRGGSGG--PDVSREGVQRDLLPLVEGSTVST- 293

Query: 225 PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGE 284
                     ++  V T +ILFI  GAF                    V K SD      
Sbjct: 294 ----------KYGPVKTDHILFIASGAF-------------------HVAKPSD------ 318

Query: 285 VLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMED 344
                         LIPE  GR P+   L+ L +    RIL+EPK +LIKQY+ L   E 
Sbjct: 319 --------------LIPELQGRFPIRVELDALTKEDFERILTEPKASLIKQYKALLKTEG 364

Query: 345 VELVFHEDALREIARCAIA-----HKTGARGLRSILEKILLDTMFELPMLKGVSSVIISD 399
           VEL F +DA++ IA  A          GAR L ++LE++L D  FE P + G   V I  
Sbjct: 365 VELEFTDDAIKRIAEIAYQVNEKTENIGARRLHTVLERLLEDISFEAPDMSG-QKVTIDA 423

Query: 400 DVVKGKACPLNVYTD 414
           + V+ K   L    D
Sbjct: 424 EYVEEKLGDLVANED 438