RPSBLAST alignment for GI: 254780271 and conserved domain: KOG0745

>gnl|CDD|35964 KOG0745, KOG0745, KOG0745, Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) [Posttranslational modification, protein turnover, chaperones]. Length = 564
 Score =  442 bits (1137), Expect = e-124
 Identities = 214/474 (45%), Positives = 289/474 (60%), Gaps = 69/474 (14%)

Query: 2   SKASNNGSVSKNALYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSITKS 61
           S A  N S+S   L C  C  SQ    +       FI  +C +  + +   +       S
Sbjct: 62  SAAPGNKSLSGGGLQCPKCT-SQCTPLETFVSSQGFILCKCNKSFVVLYEADGAKPGKLS 120

Query: 62  HEG---------IPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHS--------- 103
                        P P+EI   LD++V+GQ +AKKVL+VAV+NHYKR+ H+         
Sbjct: 121 PSNRDGGFQLKPPPTPKEICEYLDKFVVGQEKAKKVLSVAVYNHYKRIYHNEPSRQKELA 180

Query: 104 ------------------------------------SKSSNVELAKSNILLVGPTGCGKT 127
                                                   +VEL KSN+LL+GPTG GKT
Sbjct: 181 EASKSAKDRDNPIELEISESNAQWPNNQRQIAKALDEDDEDVELEKSNVLLLGPTGSGKT 240

Query: 128 YLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEV 187
            LAQTLAR++DVPF + D TTLT+AGYVGEDVE++I KLLQ A+YNVE+AQ+GIV++DEV
Sbjct: 241 LLAQTLARVLDVPFAICDCTTLTQAGYVGEDVESVIQKLLQEAEYNVEKAQQGIVFLDEV 300

Query: 188 DKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFI 247
           DKI++K+++   +RDVSGEGVQQALLK++EGT+ +VP +G R+ P+ + +Q+DTTNILFI
Sbjct: 301 DKITKKAESIHTSRDVSGEGVQQALLKLLEGTVVNVPEKGSRRKPRGDTVQIDTTNILFI 360

Query: 248 CGGAFAGLDRIISARGEKASIGFSAVVK-------------DSDNRPVGEVLRNLESEDL 294
             GAF GLD+IIS R +  S+GF A                ++D     E+L  +ES DL
Sbjct: 361 ASGAFVGLDKIISRRLDDKSLGFGAPSSKGVRANMATKSGVENDAEKRDELLEKVESGDL 420

Query: 295 VKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDAL 354
           + FG+IPEF+GR PVL  L  LDE+ L+R+L+EPKNAL KQY+ LF M++VEL F E AL
Sbjct: 421 ISFGMIPEFVGRFPVLVPLHSLDEDQLVRVLTEPKNALGKQYKKLFGMDNVELHFTEKAL 480

Query: 355 REIARCAIAHKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKGKACP 408
             IA+ A+  KTGARGLRSILE +LL+ MFE+P    + +V++ ++ VKG+  P
Sbjct: 481 EAIAQLALKRKTGARGLRSILESLLLEAMFEVPG-SDIKAVLVDEEAVKGEKEP 533