HHsearch alignment for GI: 254780272 and conserved domain: COG1024
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].
Probab=96.99 E-value=0.0012 Score=43.47 Aligned_cols=138 Identities=20% Similarity=0.244 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEEE-EC------CCCCHHHH----------------HHHHHHHHHCCCCEEEE
Q ss_conf 318989999999999974115769769999-36------87614678----------------99999986448734899
Q gi|254780272|r 50 QIEDHMATLICAQLLFLEAENPQKEISLYI-NS------PGGVVTAG----------------MAIYDTMQFIKPPISTF 106 (216)
Q Consensus 50 ~I~~~~a~~iia~Ll~L~~~~~~k~I~l~I-NS------pGG~v~~g----------------laIyD~i~~i~~~V~Ti 106 (216)
T Consensus 28 al~~~~~~~l~~al~~~~~d---~~vr~vvltG~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 104 (257)
T COG1024 28 ALNLEMLDELAEALDEAEAD---PDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAA 104 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHC---CCCEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 88999999999999999629---981699998189716717498877422310468888878899999998589999998
Q ss_pred EECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 831556652000024677714554415664412566665---55412899999999999999999998719998999997
Q gi|254780272|r 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS---GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183 (216)
Q Consensus 107 ~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~---G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~ 183 (216)
T Consensus 105 v~G~a~GgG~eLal~~D--~ria~~~a~f~~pe~~iGl~pg~g~~-------~~l~r-----------~~G~~~a--~~l 162 (257)
T COG1024 105 VNGYALGGGLELALACD--IRIAAEDAKFGLPEVNLGLLPGDGGT-------QRLPR-----------LLGRGRA--KEL 162 (257)
T ss_pred ECCHHHHHHHHHHHHCC--EEEECCCCEEECCCCCCCCCCCCCHH-------HHHHH-----------HCCHHHH--HHH
T ss_conf 36501467889987088--79834777885541342658784588-------99999-----------7396889--999
Q ss_pred HCCCCCCCHHHHHHCCCCCEEECCCCCCC
Q ss_conf 24585888899997588644604542251
Q gi|254780272|r 184 LDRDHIMSASEACDWGVVDKVLMSRIDIE 212 (216)
Q Consensus 184 ~~rD~~lsa~EA~eyGliD~Ii~~~~e~~ 212 (216)
T Consensus 163 ~ltg~~~~a~eA~~~Glv~~vv~~~~~l~ 191 (257)
T COG1024 163 LLTGEPISAAEALELGLVDEVVPDAEELL 191 (257)
T ss_pred HHCCCCCCHHHHHHCCCCCEECCCHHHHH
T ss_conf 98289888999997899146658768899