HHsearch alignment for GI: 254780272 and conserved domain: PRK12551
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed.
Probab=100.00 E-value=0 Score=480.11 Aligned_cols=194 Identities=51% Similarity=0.849 Sum_probs=190.9
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 57579766599840122003451467799878318989999999999974115769769999368761467899999986
Q gi|254780272|r 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97 (216)
Q Consensus 18 ~~p~~~e~~~~~~~~~Di~s~L~~~Riifl~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpGG~v~~glaIyD~i~ 97 (216)
T Consensus 1 ~~p~~~~~~~~g~~~~Di~~~L~~~Riifl~~~i~~~~a~~ii~~ll~L~~e~~~k~I~lyINSpGG~v~~glaIyD~m~ 80 (196)
T PRK12551 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQ 80 (196)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 98869987799850132777876278899898127899999999999860729799979999799866655699999996
Q ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 44873489983155665200002467771455441566441256666555412899999999999999999998719998
Q gi|254780272|r 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177 (216)
Q Consensus 98 ~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~ 177 (216)
T Consensus 81 ~~~~~V~Ti~~G~aaS~as~il~aG~kgkR~~~pns~iMIHqp~~~~~G~a~di~~~a~el~~~~~~i~~i~a~~Tg~~~ 160 (196)
T PRK12551 81 HVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPL 160 (196)
T ss_pred HCCCCEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 26999799996240225678997488886012656024770567675675879999999999999999999999879599
Q ss_pred HHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCC
Q ss_conf 9999972458588889999758864460454225
Q gi|254780272|r 178 EEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211 (216)
Q Consensus 178 e~i~~~~~rD~~lsa~EA~eyGliD~Ii~~~~e~ 211 (216)
T Consensus 161 ~~I~~~~~rd~~msa~EA~~yGliD~Il~~r~v~ 194 (196)
T PRK12551 161 ERIQEDTDRDFFMSPSEAVEYGLIDLVIDKRPVK 194 (196)
T ss_pred HHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCC
T ss_conf 9999873578606799999829987860789877