HHsearch alignment for GI: 254780272 and conserved domain: PRK12553
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed.
Probab=100.00 E-value=0 Score=485.04 Aligned_cols=195 Identities=48% Similarity=0.833 Sum_probs=192.1
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 57579766599840122003451467799878318989999999999974115769769999368761467899999986
Q gi|254780272|r 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97 (216)
Q Consensus 18 ~~p~~~e~~~~~~~~~Di~s~L~~~Riifl~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpGG~v~~glaIyD~i~ 97 (216)
T Consensus 8 ~~p~~~~~~~~~~~~~diy~~L~~~Riifl~~~i~~~~a~~iia~ll~L~~~~~~kpI~lyINSpGG~v~~glaIyD~m~ 87 (204)
T PRK12553 8 ILPSFIERTSYGVKESNPYNKLFEERIIFLGGQVDDASANDVMAQLLVLESIDPDRPITMYINSPGGSVTSGDAIYDTIQ 87 (204)
T ss_pred CCCEEEEECCCCCEEHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 07779997699862004888986178899888338899999999999974739599989999799855768999999999
Q ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 44873489983155665200002467771455441566441256--6665554128999999999999999999987199
Q gi|254780272|r 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175 (216)
Q Consensus 98 ~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps--~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~ 175 (216)
T Consensus 88 ~~~~~V~Ti~~G~aaS~aslil~aG~kgkR~a~pns~iMiHqP~~~gg~~G~a~di~i~a~ei~~~~~~i~~iya~~Tg~ 167 (204)
T PRK12553 88 FVRPDVQTVGTGQAASAGAVLLAAGTPGKRFALPNTRFLIHQPSLGGGIQGQASDLEIQAREILRMRERLERTLAEATGQ 167 (204)
T ss_pred HCCCCEEEEEEEEHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56998499997475556889996177466463688746773765347865557689999999999999999999988697
Q ss_pred CHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCC
Q ss_conf 9899999724585888899997588644604542251
Q gi|254780272|r 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212 (216)
Q Consensus 176 ~~e~i~~~~~rD~~lsa~EA~eyGliD~Ii~~~~e~~ 212 (216)
T Consensus 168 ~~e~i~~~~~rd~~msa~EA~eyGliD~Ii~~~~d~~ 204 (204)
T PRK12553 168 PREKIRKDTDRDKWLTAEEAKDYGLVDQILTSRKDLA 204 (204)
T ss_pred CHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCHHHCC
T ss_conf 9999998724785157999998199978716322139