HHsearch alignment for GI: 254780272 and conserved domain: TIGR00513

>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; InterPro: IPR001095 This entry contains the alpha subunit the acetyl coenzyme A carboxylase complex (). It catalyzes the first step in the synthesis of long-chain fatty acids which involves the carboxylation of acetyl-CoA to malonyl-CoA. The acetyl-CoA carboxylase complex () is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and two non-identical carboxyl transferase subunits (alpha and beta) in a 2:2 association . The reaction involves two steps: Biotin carrier protein + ATP + HCO_3^- -> Carboxybiotin carrier protein + ADP + P_i Carboxybiotin carrier protein + Acetyl-CoA -> Malonyl-CoA + Biotin carrier protein ; GO: 0003989 acetyl-CoA carboxylase activity, 0006633 fatty acid biosynthetic process, 0009317 acetyl-CoA carboxylase complex.
Probab=96.66  E-value=0.0046  Score=39.77  Aligned_cols=109  Identities=23%  Similarity=0.384  Sum_probs=73.3

Q ss_pred             HCCCCCCEEEEEECCC----------CCHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHH
Q ss_conf             1157697699993687----------61467-899999986448734899831556652000024677714554415664
Q gi|254780272|r   68 AENPQKEISLYINSPG----------GVVTA-GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL  136 (216)
Q Consensus        68 ~~~~~k~I~l~INSpG----------G~v~~-glaIyD~i~~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iM  136 (216)
T Consensus       155 AerF~~PIi~fiDT~GAYPGigAEerGQsEAIA~NL~E-ma~L~VPvic~vIGEGGSGGALaiGVGD--kv~MLeyS~YS  231 (329)
T TIGR00513       155 AERFNLPIITFIDTPGAYPGIGAEERGQSEAIAKNLRE-MARLKVPVICTVIGEGGSGGALAIGVGD--KVNMLEYSTYS  231 (329)
T ss_pred             HHHCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHH-HHCCCCCEEEEEECCCCCHHHHHHHHHH--HHHHHHHHHHC
T ss_conf             77617985886538888756204450527899999899-7109988799985268614789998988--99887620220


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             4125666655541289999999999999999999871999899999724585888899997588644604
Q gi|254780272|r  137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM  206 (216)
Q Consensus       137 iHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~lsa~EA~eyGliD~Ii~  206 (216)
T Consensus       232 ViSPEGC----AaiL---Wkda~ka~~Aa----------------~am----kItA~dLkel~lID~iI~  274 (329)
T TIGR00513       232 VISPEGC----AAIL---WKDASKAEKAA----------------EAM----KITAPDLKELGLIDSIIP  274 (329)
T ss_pred             CCCHHHH----HHHC---CCCHHHHHHHH----------------HHH----CCCHHHHHHCCCCCCCCC
T ss_conf             0087889----9860---67962679999----------------983----789215664013431016