HHsearch results for GI: 254780272 and protein with PDBid: 1pix_A

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.83  E-value=0.00025  Score=46.39  Aligned_cols=146  Identities=10%  Similarity=0.150  Sum_probs=90.9

Q ss_pred             ECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC----------CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf             8783189899999999999741157697699993687----------614678999999864487348998315566520
Q gi|254780272|r   47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG----------GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS  116 (216)
Q Consensus        47 l~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpG----------G~v~~glaIyD~i~~i~~~V~Ti~~G~aaS~as  116 (216)
                      .+|.++.+.+.....-+...+.  -.-||-.++|.||          |-+..|-.+.+++...+.|+.||.+|.+++.|.
T Consensus       383 ~gG~l~~~sa~Kaarfi~lcd~--~~iPlv~lvD~pGf~~G~~~E~~Giir~gA~l~~A~a~a~vP~itvi~rkayGga~  460 (587)
T 1pix_A          383 IGGKLYRQGLVKMNEFVTLCAR--DRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAH  460 (587)
T ss_dssp             ETTEECHHHHHHHHHHHHHHHH--TTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHH--CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
T ss_conf             6896687899999999998764--29966897158887887699998899999999988873799979999798531677


Q ss_pred             CCCCCCCCC----CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-----C
Q ss_conf             000246777----1455441566441256666555412899999999999999999998719998999997245-----8
Q gi|254780272|r  117 LLLSAGEKG----MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR-----D  187 (216)
Q Consensus       117 lIl~aG~~g----~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~r-----D  187 (216)
                      +.+++..-+    ..++.|++++-.-.|.+.+     ++. ..+++.+         ++..++..+++.+..+.     .
T Consensus       461 ~am~~~~~~~~~~~~~a~p~a~i~vm~~e~av-----~i~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  525 (587)
T 1pix_A          461 YVLGGPQGNDTNAFSIGTAATEIAVMNGETAA-----TAM-YSRRLAK---------DRKAGKDLQPTIDKMNNLIQAFY  525 (587)
T ss_dssp             HHTTCTTCTTTEEEEEECTTCEEESSCHHHHH-----HHH-HHHHHHH---------HHHTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCCEEEEECCCCCCCCCCCHHHHH-----HHH-HHHHHHH---------CCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             87347656886137721887626157999999-----999-8887652---------21445244589999999999998


Q ss_pred             CCCCHHHHHHCCCCCEEECCCC
Q ss_conf             5888899997588644604542
Q gi|254780272|r  188 HIMSASEACDWGVVDKVLMSRI  209 (216)
Q Consensus       188 ~~lsa~EA~eyGliD~Ii~~~~  209 (216)
                      .-.+|..|-+.|+||+||+++.
T Consensus       526 ~~~~p~~aa~~g~vD~iIdP~~  547 (587)
T 1pix_A          526 TKSRPKVCAELGLVDEIVDMNK  547 (587)
T ss_dssp             HTTSHHHHHHHTSSSEECCTTT
T ss_pred             HHCCHHHHHHCCCCCEEECHHH
T ss_conf             7369999997288681288399