HHsearch results for GI: 254780272 and protein with PDBid: 1q52_A
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=97.78 E-value=0.00024 Score=46.52 Aligned_cols=170 Identities=15% Similarity=0.183 Sum_probs=98.1
Q ss_pred CCCCEEEEECCCCCCCCCH-HHHHHCCCEEE--ECC-----CCCHHHHHHHHHHHHHHHHCCCCCCEEEEE-E-------
Q ss_conf 4575797665998401220-03451467799--878-----318989999999999974115769769999-3-------
Q gi|254780272|r 17 GLVPMVVEQTNRGERSYDI-YSRLLKERIVF--VTG-----QIEDHMATLICAQLLFLEAENPQKEISLYI-N------- 80 (216)
Q Consensus 17 ~~~p~~~e~~~~~~~~~Di-~s~L~~~Riif--l~g-----~I~~~~a~~iia~Ll~L~~~~~~k~I~l~I-N------- 80 (216)
|..|......+.-++..|| |.+-..+.|.- |+- .++.++...+...|..++.. + ++.+.| .
T Consensus 19 p~~~~~~~~~~~~~~~~di~~~~~~ddgVa~ItLNrP~~~NAl~~~m~~eL~~al~~~~~d-~--~vrvvVltG~~~~~~ 95 (314)
T 1q52_A 19 PFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMS-P--DVGVVLLTGNGPSPK 95 (314)
T ss_dssp CCCGGGEEECTTCTTCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHC-T--TCCEEEEEECCCCTT
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC-C--CCCEEEEECCCCCCC
T ss_conf 9982004225777877516999973399899995587756898999999999999999749-9--975899957887665
Q ss_pred ------CCCCCHHH--------------------------HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf ------68761467--------------------------8999999864487348998315566520000246777145
Q gi|254780272|r 81 ------SPGGVVTA--------------------------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128 (216)
Q Consensus 81 ------SpGG~v~~--------------------------glaIyD~i~~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~ 128 (216)
|.|+++.. ...+++.|..++.||...+-|.|.+.|..|.++++ .|+
T Consensus 96 sgG~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lalacD--~~i 173 (314)
T 1q52_A 96 DGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCD--LTL 173 (314)
T ss_dssp TCCCEEECCC-----------------------------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSS--EEE
T ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHCC--CHH
T ss_conf 521023347675665312444333342012667888889999999999858998899983766102138876123--112
Q ss_pred ECCCH-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEE
Q ss_conf 54415-66441256666---555412899999999999999999998719998999997245858888999975886446
Q gi|254780272|r 129 ALPNA-RILLHQPSGGF---SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204 (216)
Q Consensus 129 ~~pns-~iMiHqps~~~---~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~lsa~EA~eyGliD~I 204 (216)
+.+++ ++-+-....|. .|-..-+ .+..|. ....+.+-.-..++|+||+++||||+|
T Consensus 174 as~~a~~f~~pe~~lGl~p~~g~~~~L------------------~~~vG~--~~A~~llltg~~i~a~eA~~~Glv~~v 233 (314)
T 1q52_A 174 ASREYARFKQTDADVGSFDGGYGSAYL------------------ARQVGQ--KFAREIFFLGRTYTAEQMHQMGAVNAV 233 (314)
T ss_dssp EETTTCEEECCGGGGTCCCCSTTTHHH------------------HHHHCH--HHHHHHHHHCCEECHHHHHHHTSCSEE
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHH------------------HHHHHH--HHHHHHHHHCCCCCHHHHHCCCCEEEE
T ss_conf 100377766444045878885069999------------------998569--999999985898888897307832796
Q ss_pred ECCCCCCC
Q ss_conf 04542251
Q gi|254780272|r 205 LMSRIDIE 212 (216)
Q Consensus 205 i~~~~e~~ 212 (216)
+.. .++.
T Consensus 234 v~~-~el~ 240 (314)
T 1q52_A 234 AEH-AELE 240 (314)
T ss_dssp ECG-GGHH
T ss_pred CCH-HHHH
T ss_conf 387-8999