HHsearch results for GI: 254780272 and protein with PDBid: 3bf0_A
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.90 E-value=4.3e-05 Score=51.24 Aligned_cols=151 Identities=17% Similarity=0.093 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECC-CCCHHHHHHHHHHHHHC---CCCEEEEEECCCCCCCCCCCCCCCCCCEEE
Q ss_conf 89999999999974115769769999368-76146789999998644---873489983155665200002467771455
Q gi|254780272|r 54 HMATLICAQLLFLEAENPQKEISLYINSP-GGVVTAGMAIYDTMQFI---KPPISTFCMGQAASMGSLLLSAGEKGMRFA 129 (216)
Q Consensus 54 ~~a~~iia~Ll~L~~~~~~k~I~l~INSp-GG~v~~glaIyD~i~~i---~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~ 129 (216)
..-.+++..|-.....+.-+-|.|.++|+ ||++.....|.++|+.. ..||..++ ..++.+...+++... +-|+
T Consensus 70 ~~l~div~~i~~Aa~D~~IkgIvL~~~~~~gg~~a~~~ei~~al~~fk~sgKpVvA~~--~~~~~~~Y~LAS~AD-~I~~ 146 (593)
T 3bf0_A 70 NSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVG--ENYSQGQYYLASFAN-KIWL 146 (593)
T ss_dssp EEHHHHHHHHHHHHHCTTCCCEEEECTEEEECCHHHHHHHHHHHHHHHHTTCCEEEEE--SCEEHHHHHHHTTSS-EEEE
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE--CCCCHHHHHHHHHCC-EEEE
T ss_conf 4499999999998349995089998069888738999999999999997099299996--155213237464389-8998
Q ss_pred CCCHHHHHHHHHHH------H------------HHH------------HHHH--HHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 44156644125666------6------------555------------4128--99999999999999999998719998
Q gi|254780272|r 130 LPNARILLHQPSGG------F------------SGQ------------ASDI--ERHAQDIVKIKRRLNEIYVKNCGKTY 177 (216)
Q Consensus 130 ~pns~iMiHqps~~------~------------~G~------------~~di--~~~a~el~~~~~~l~~i~a~~Tg~~~ 177 (216)
.|.+.+.+.-.... + .|. .++- +..-..+..+.+.+.+..++.-+.+.
T Consensus 147 ~p~g~v~~~G~~~~~~~~k~~LdKlGI~~~v~~~G~yKsa~epf~~~~mS~e~re~~~~ll~~l~~~f~~~Va~~R~l~~ 226 (593)
T 3bf0_A 147 SPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPA 226 (593)
T ss_dssp CTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred CCCCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 89966888703886256778999759806999615645667866667899999999999999999999999988627883
Q ss_pred HHHHHH-------HCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf 999997-------245858888999975886446045
Q gi|254780272|r 178 EEVEKT-------LDRDHIMSASEACDWGVVDKVLMS 207 (216)
Q Consensus 178 e~i~~~-------~~rD~~lsa~EA~eyGliD~Ii~~ 207 (216)
+.+... +.....++|++|++.||||++...
T Consensus 227 ~~v~~~~~~~~~~l~~~~~~~a~~Al~~gLVD~l~~~ 263 (593)
T 3bf0_A 227 EQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 263 (593)
T ss_dssp HHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCH
T ss_pred HHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
T ss_conf 1122345568888776076149999986554200125