HHsearch results for GI: 254780272 and protein with PDBid: 3isa_A
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Bordetella parapertussis}
Probab=98.08 E-value=5.7e-05 Score=50.45 Aligned_cols=162 Identities=13% Similarity=0.098 Sum_probs=98.4
Q ss_pred CCCCCEEEEECCCCCCC-CCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC------CCHHH
Q ss_conf 24575797665998401-220034514677998783189899999999999741157697699993687------61467
Q gi|254780272|r 16 LGLVPMVVEQTNRGERS-YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG------GVVTA 88 (216)
Q Consensus 16 ~~~~p~~~e~~~~~~~~-~Di~s~L~~~Riifl~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpG------G~v~~ 88 (216)
....|..+|+++.-... +|=+.+ ...++.++...+...+-.++. ++ ---+.|.+.| +++.+
T Consensus 4 s~~~~l~~e~~~~v~tiTlnrP~~---------~Nal~~~m~~el~~al~~~~~--~~-v~~vVltg~g~~F~aG~Dl~~ 71 (254)
T 3isa_A 4 SASLPLAIERRPAAWTFTLSRPEK---------RNALSAELVEALIDGVDAAHR--EQ-VPLLVFAGAGRNFSAGFDFTD 71 (254)
T ss_dssp CCCCSEEEEECSSEEEEEECCGGG---------TTCBCHHHHHHHHHHHHHHHH--TT-CSEEEEEESTTCSCCCBCCTT
T ss_pred CCCCCEEEEEECCEEEEEECCCCC---------CCCCCHHHHHHHHHHHHHHHC--CC-CEEEEEECCCCCCCCCCCHHH
T ss_conf 888726999889999999557565---------789999999999999999757--99-549999788997116987043
Q ss_pred ---------------HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---------------89999998644873489983155665200002467771455441566441256666555412899
Q gi|254780272|r 89 ---------------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153 (216)
Q Consensus 89 ---------------glaIyD~i~~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~ 153 (216)
...++..|..++.||...+-|.|.+.|..+.++++ .|++.++++|-+-...-|... -.
T Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lal~~D--~ria~~~a~f~~pe~~~Gl~p---g~-- 144 (254)
T 3isa_A 72 YETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACK--WRYCTPEAGFRMPGLKFGLVL---GT-- 144 (254)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSS--EEEECTTCEEECCGGGGTCCC---SH--
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCC--EEEECCCCCCCCCCEEEEECC---CC--
T ss_conf 10110012456678999999999858998999679718764762355577--689765435557510250057---76--
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCC
Q ss_conf 99999999999999999871999899999724585888899997588644604542251
Q gi|254780272|r 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212 (216)
Q Consensus 154 ~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~lsa~EA~eyGliD~Ii~~~~e~~ 212 (216)
. .+ .+..|. .+-.+.+-....++|+||+++||||+|+.. .+++
T Consensus 145 --~---~l--------~r~iG~--~~A~~llltg~~~~a~eA~~~GLv~~vv~~-~~l~ 187 (254)
T 3isa_A 145 --R---RF--------RDIVGA--DQALSILGSARAFDADEARRIGFVRDCAAQ-AQWP 187 (254)
T ss_dssp --H---HH--------HHHHCH--HHHHHHHTTTCEEEHHHHHHTTSSSEECCG-GGHH
T ss_pred --C---CC--------HHHCCH--HHHHHHHHHCCCCCHHHHHHCCCHHEECCH-HHHH
T ss_conf --5---43--------444169--999999860677677899976973156288-7999