RPSBLAST alignment for GI: 254780273 and conserved domain: smart00382
>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment. Length = 148
Score = 50.5 bits (120), Expect = 1e-06
Identities = 37/171 (21%), Positives = 60/171 (35%), Gaps = 46/171 (26%)
Query: 342 PGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIHVGETVCLSYVDQSRDSLEAEKTVWED 401
PG ++ ++GP G+GKTTL R L + P G
Sbjct: 1 PGEVILIVGPPGSGKTTLARALARELGPPGG----------------------------- 31
Query: 402 ISGGDDIVKLNGHEINSRAYCSAFNFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVIL 461
++ ++G +I G ++ S SG R R+ LA K +V++
Sbjct: 32 -----GVIYIDGEDILEEVLDQLLLIIVGGKK---ASGSGELRLRLALALARKLKPDVLI 83
Query: 462 LDEPTNDLDTETLSALEDALENFAG---------CAVIISHDRMFLDRLAT 503
LDE T+ LD E + L E ++ ++D L
Sbjct: 84 LDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVILTTNDEKDLGPALL 134