RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 81.2 bits (201), Expect = 7e-16
 Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 61/220 (27%)

Query: 17  GSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGI------------------DKE 58
           G K  L  I+        + I+GP+G+GKST+ R++ GI                  D+E
Sbjct: 329 GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388

Query: 59  YNGEAWLATGFTVGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEE- 117
             G+        +GYLPQ+ +L    TV ENI        A      +      EK  E 
Sbjct: 389 TFGK-------HIGYLPQDVEL-FPGTVAENI--------ARFGENAD-----PEKIIEA 427

Query: 118 -EIAKLQDIIDS--KGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSS 174
            ++A + ++I     G    +T +                 +LSGG+++R+AL + L   
Sbjct: 428 AKLAGVHELILRLPDG---YDTVIGPGGA------------TLSGGQRQRIALARALYGD 472

Query: 175 PDLLLLDEPTNHLDAE-TIAWME--KYLREYSGAVLMVTH 211
           P L++LDEP ++LD E   A     K L+     V+++TH
Sbjct: 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITH 512