RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544
 Score = 78.2 bits (193), Expect = 5e-15
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 40/209 (19%)

Query: 314 GHVVIEAKGISKSYNDRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGT 373
           GH+ +E   I      +  +  +SF+L  G  + +IGP+G+GK+TL R++ G   P SG+
Sbjct: 315 GHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGS 374

Query: 374 IHV-------------GETVCLSYVDQSRDSLEAEKTVWEDISGGDDIV---------KL 411
           + +             G+ +   Y+ Q  +      TV E+I+   +           KL
Sbjct: 375 VRLDGADLKQWDRETFGKHI--GYLPQDVELFPG--TVAENIARFGENADPEKIIEAAKL 430

Query: 412 NG-HEINSR---AYCSAFNFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTN 467
            G HE+  R    Y +     G        +LSGGQR R+ LA+ L     +++LDEP +
Sbjct: 431 AGVHELILRLPDGYDTVIGPGG-------ATLSGGQRQRIALARALYGDPKLVVLDEPNS 483

Query: 468 DLDTETLSALEDALENF---AGCAVIISH 493
           +LD E   AL +A++         V+I+H
Sbjct: 484 NLDEEGEQALANAIKALKARGITVVVITH 512