RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score = 92.4 bits (230), Expect = 2e-19
 Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 34/216 (15%)

Query: 317 VIEAKGISKSYNDR--LLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTI 374
            +E  G+S +Y  R    +  +SF +PPG  V ++GP+GAGK+TL  +L G   P  G+I
Sbjct: 320 SLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSI 379

Query: 375 HV-GETVCLSYVDQSRDSLE--------AEKTVWEDISGG-----DDIVKLNGHEINSRA 420
            V G  +  +  D  RD +            T+ E+I        D  ++        RA
Sbjct: 380 AVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIR----RALERA 435

Query: 421 YCSAF--------NFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTNDLDTE 472
               F        +   G+       LSGGQ  R+ LA+       ++LLDEPT  LD E
Sbjct: 436 GLDEFVAALPQGLDTLIGEGGAG---LSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAE 492

Query: 473 TLSALEDALENFAGCA--VIISHDRMFLDRLATHIL 506
           T + + +AL   A     ++++H        A  I+
Sbjct: 493 TEALVTEALRALAQGRTVLLVTHRLALA-ERADRIV 527